Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.27■■□□□ 1.8
USP6P35125 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP6P35125 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP6P35125 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP6P35125 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP6P35125 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP6P35125 PHB2-202ENST00000440277 996 ntTSL 5 BASIC26.27■■□□□ 1.8
USP6P35125 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC26.27■■□□□ 1.8
USP6P35125 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC26.27■■□□□ 1.8
USP6P35125 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
USP6P35125 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP6P35125 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
USP6P35125 Telomerase-vert.1-201ENST00000363312 438 ntBASIC26.26■■□□□ 1.79
USP6P35125 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC26.26■■□□□ 1.79
USP6P35125 NEK4P2-201ENST00000580004 1012 ntBASIC26.26■■□□□ 1.79
USP6P35125 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP6P35125 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
USP6P35125 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC26.26■■□□□ 1.79
USP6P35125 GABARAPL3-202ENST00000624044 1851 ntBASIC26.26■■□□□ 1.79
USP6P35125 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6P35125 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP6P35125 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6P35125 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP6P35125 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6P35125 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP6P35125 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC26.25■■□□□ 1.79
USP6P35125 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC26.25■■□□□ 1.79
USP6P35125 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP6P35125 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP6P35125 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP6P35125 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP6P35125 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC26.25■■□□□ 1.79
USP6P35125 TOLLIP-AS1-201ENST00000530897 939 ntBASIC26.25■■□□□ 1.79
USP6P35125 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC26.25■■□□□ 1.79
USP6P35125 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC26.25■■□□□ 1.79
USP6P35125 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.25■■□□□ 1.79
USP6P35125 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC26.25■■□□□ 1.79
USP6P35125 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP6P35125 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP6P35125 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP6P35125 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC26.24■■□□□ 1.79
USP6P35125 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC26.24■■□□□ 1.79
USP6P35125 DFFB-212ENST00000625756 649 ntTSL 5 BASIC26.24■■□□□ 1.79
USP6P35125 TBC1D3P2-202ENST00000577902 1649 ntBASIC26.24■■□□□ 1.79
USP6P35125 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP6P35125 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
USP6P35125 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP6P35125 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.24■■□□□ 1.79
USP6P35125 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP6P35125 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
USP6P35125 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP6P35125 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC26.23■■□□□ 1.79
USP6P35125 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP6P35125 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP6P35125 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC26.23■■□□□ 1.79
USP6P35125 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
USP6P35125 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC26.23■■□□□ 1.79
USP6P35125 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC26.23■■□□□ 1.79
USP6P35125 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC26.23■■□□□ 1.79
USP6P35125 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
USP6P35125 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC26.23■■□□□ 1.79
USP6P35125 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC26.23■■□□□ 1.79
USP6P35125 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP6P35125 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP6P35125 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC26.23■■□□□ 1.79
USP6P35125 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP6P35125 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC26.23■■□□□ 1.79
USP6P35125 ILF2-202ENST00000368681 726 ntTSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP6P35125 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 DAP-202ENST00000432074 1048 ntTSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 SNX5-210ENST00000481323 562 ntTSL 3 BASIC26.22■■□□□ 1.79
USP6P35125 CD81-212ENST00000526072 1172 ntTSL 5 BASIC26.22■■□□□ 1.79
USP6P35125 HYMAI.1-201ENST00000620949 238 ntBASIC26.22■■□□□ 1.79
USP6P35125 AL391422.3-201ENST00000603791 2761 ntBASIC26.22■■□□□ 1.79
USP6P35125 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.22■■□□□ 1.79
USP6P35125 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 AC104417.2-201ENST00000562989 1793 ntBASIC26.22■■□□□ 1.79
USP6P35125 AP000523.1-201ENST00000398242 1049 ntBASIC26.22■■□□□ 1.79
USP6P35125 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
USP6P35125 SPDYE15P-201ENST00000424157 909 ntBASIC26.22■■□□□ 1.79
USP6P35125 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP6P35125 KRT18P56-201ENST00000507275 550 ntBASIC26.22■■□□□ 1.79
USP6P35125 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
USP6P35125 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC26.22■■□□□ 1.79
USP6P35125 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6P35125 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6P35125 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC26.21■■□□□ 1.79
USP6P35125 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP6P35125 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6P35125 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6P35125 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6P35125 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC26.21■■□□□ 1.79
USP6P35125 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6P35125 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP6P35125 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms