Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.73■□□□□ 0.27
CD40P25942 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.73■□□□□ 0.27
CD40P25942 AC091390.4-202ENST00000476426 537 ntBASIC16.73■□□□□ 0.27
CD40P25942 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.73■□□□□ 0.27
CD40P25942 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 SLC25A1P4-201ENST00000567977 778 ntBASIC16.73■□□□□ 0.27
CD40P25942 AC010947.1-201ENST00000623454 693 ntBASIC16.73■□□□□ 0.27
CD40P25942 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CD40P25942 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.73■□□□□ 0.27
CD40P25942 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CD40P25942 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.73■□□□□ 0.27
CD40P25942 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CD40P25942 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.72■□□□□ 0.27
CD40P25942 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.72■□□□□ 0.27
CD40P25942 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD40P25942 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.72■□□□□ 0.27
CD40P25942 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CD40P25942 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.72■□□□□ 0.27
CD40P25942 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.72■□□□□ 0.27
CD40P25942 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CD40P25942 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.72■□□□□ 0.27
CD40P25942 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CD40P25942 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.72■□□□□ 0.27
CD40P25942 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.72■□□□□ 0.27
CD40P25942 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.72■□□□□ 0.27
CD40P25942 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.72■□□□□ 0.27
CD40P25942 C2orf69P3-201ENST00000565542 1120 ntBASIC16.72■□□□□ 0.27
CD40P25942 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.72■□□□□ 0.27
CD40P25942 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.72■□□□□ 0.27
CD40P25942 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CD40P25942 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD40P25942 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CD40P25942 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CD40P25942 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CD40P25942 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CD40P25942 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.71■□□□□ 0.27
CD40P25942 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
CD40P25942 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.71■□□□□ 0.27
CD40P25942 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.71■□□□□ 0.27
CD40P25942 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.71■□□□□ 0.27
CD40P25942 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.71■□□□□ 0.27
CD40P25942 KRT18P21-201ENST00000515767 1272 ntBASIC16.71■□□□□ 0.27
CD40P25942 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.71■□□□□ 0.27
CD40P25942 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CD40P25942 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.71■□□□□ 0.27
CD40P25942 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.71■□□□□ 0.27
CD40P25942 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.71■□□□□ 0.27
CD40P25942 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD40P25942 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CD40P25942 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CD40P25942 KRT18P22-201ENST00000402024 1347 ntBASIC16.7■□□□□ 0.26
CD40P25942 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD40P25942 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD40P25942 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CD40P25942 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CD40P25942 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD40P25942 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD40P25942 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms