Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNA3P22001 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
KCNA3P22001 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KCNA3P22001 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
KCNA3P22001 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.85■■□□□ 1.41
KCNA3P22001 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KCNA3P22001 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KCNA3P22001 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.85■■□□□ 1.41
KCNA3P22001 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KCNA3P22001 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.85■■□□□ 1.41
KCNA3P22001 AP002414.4-201ENST00000589764 1148 ntBASIC23.85■■□□□ 1.41
KCNA3P22001 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.85■■□□□ 1.41
KCNA3P22001 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNA3P22001 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNA3P22001 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNA3P22001 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNA3P22001 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNA3P22001 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
KCNA3P22001 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.84■■□□□ 1.41
KCNA3P22001 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNA3P22001 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNA3P22001 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.84■■□□□ 1.41
KCNA3P22001 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.84■■□□□ 1.41
KCNA3P22001 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.84■■□□□ 1.41
KCNA3P22001 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.84■■□□□ 1.41
KCNA3P22001 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNA3P22001 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.83■■□□□ 1.41
KCNA3P22001 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNA3P22001 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.83■■□□□ 1.41
KCNA3P22001 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.83■■□□□ 1.41
KCNA3P22001 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNA3P22001 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNA3P22001 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNA3P22001 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNA3P22001 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNA3P22001 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
KCNA3P22001 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNA3P22001 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.83■■□□□ 1.41
KCNA3P22001 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
KCNA3P22001 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
KCNA3P22001 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNA3P22001 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.83■■□□□ 1.41
KCNA3P22001 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNA3P22001 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
KCNA3P22001 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNA3P22001 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.83■■□□□ 1.4
KCNA3P22001 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.4
KCNA3P22001 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNA3P22001 KRT18P1-202ENST00000452408 1331 ntBASIC23.83■■□□□ 1.4
KCNA3P22001 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNA3P22001 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNA3P22001 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 FEM1AP4-201ENST00000443167 1987 ntBASIC23.82■■□□□ 1.4
KCNA3P22001 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.82■■□□□ 1.4
KCNA3P22001 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.82■■□□□ 1.4
KCNA3P22001 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 AL671883.3-201ENST00000603274 991 ntBASIC23.82■■□□□ 1.4
KCNA3P22001 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNA3P22001 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.82■■□□□ 1.4
KCNA3P22001 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
KCNA3P22001 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.81■■□□□ 1.4
KCNA3P22001 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNA3P22001 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
KCNA3P22001 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNA3P22001 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNA3P22001 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.81■■□□□ 1.4
KCNA3P22001 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.81■■□□□ 1.4
KCNA3P22001 FBXW4P1-201ENST00000426721 2239 ntBASIC23.81■■□□□ 1.4
KCNA3P22001 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
KCNA3P22001 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.81■■□□□ 1.4
KCNA3P22001 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNA3P22001 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
KCNA3P22001 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.81■■□□□ 1.4
KCNA3P22001 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNA3P22001 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNA3P22001 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.8■■□□□ 1.4
KCNA3P22001 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KCNA3P22001 AC106795.1-205ENST00000512851 1056 ntBASIC23.8■■□□□ 1.4
KCNA3P22001 SLC25A6P4-201ENST00000586535 553 ntBASIC23.8■■□□□ 1.4
KCNA3P22001 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
KCNA3P22001 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KCNA3P22001 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
KCNA3P22001 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.8■■□□□ 1.4
KCNA3P22001 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.8■■□□□ 1.4
KCNA3P22001 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.79■■□□□ 1.4
KCNA3P22001 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KCNA3P22001 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.79■■□□□ 1.4
KCNA3P22001 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
KCNA3P22001 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms