Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.55■□□□□ 0.88
RB1P06400 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.55■□□□□ 0.88
RB1P06400 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.55■□□□□ 0.88
RB1P06400 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 SMG8-203ENST00000578922 2178 ntBASIC20.55■□□□□ 0.88
RB1P06400 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RB1P06400 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
RB1P06400 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RB1P06400 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RB1P06400 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RB1P06400 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RB1P06400 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RB1P06400 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.54■□□□□ 0.88
RB1P06400 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.54■□□□□ 0.88
RB1P06400 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RB1P06400 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RB1P06400 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.54■□□□□ 0.88
RB1P06400 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RB1P06400 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RB1P06400 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.54■□□□□ 0.88
RB1P06400 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.54■□□□□ 0.88
RB1P06400 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.53■□□□□ 0.88
RB1P06400 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.53■□□□□ 0.88
RB1P06400 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RB1P06400 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
RB1P06400 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.53■□□□□ 0.88
RB1P06400 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.53■□□□□ 0.88
RB1P06400 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.53■□□□□ 0.88
RB1P06400 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RB1P06400 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.53■□□□□ 0.88
RB1P06400 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.53■□□□□ 0.88
RB1P06400 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.53■□□□□ 0.88
RB1P06400 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.53■□□□□ 0.88
RB1P06400 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.53■□□□□ 0.88
RB1P06400 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RB1P06400 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 LINC01465-201ENST00000408887 1940 ntBASIC20.53■□□□□ 0.88
RB1P06400 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RB1P06400 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RB1P06400 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.52■□□□□ 0.88
RB1P06400 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RB1P06400 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RB1P06400 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RB1P06400 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RB1P06400 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RB1P06400 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.52■□□□□ 0.88
RB1P06400 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.52■□□□□ 0.88
RB1P06400 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.52■□□□□ 0.88
RB1P06400 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.52■□□□□ 0.88
RB1P06400 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RB1P06400 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.52■□□□□ 0.87
RB1P06400 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
RB1P06400 AF106564.1-201ENST00000607058 2553 ntBASIC20.51■□□□□ 0.87
RB1P06400 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RB1P06400 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RB1P06400 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RB1P06400 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RB1P06400 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RB1P06400 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.51■□□□□ 0.87
RB1P06400 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.51■□□□□ 0.87
RB1P06400 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.51■□□□□ 0.87
RB1P06400 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RB1P06400 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.51■□□□□ 0.87
RB1P06400 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RB1P06400 KRT8P11-201ENST00000409686 1436 ntBASIC20.51■□□□□ 0.87
RB1P06400 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.51■□□□□ 0.87
RB1P06400 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RB1P06400 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.5■□□□□ 0.87
RB1P06400 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RB1P06400 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.5■□□□□ 0.87
RB1P06400 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RB1P06400 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RB1P06400 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
RB1P06400 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RB1P06400 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.5■□□□□ 0.87
RB1P06400 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms