Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC25.62■■□□□ 1.69
COL5A2P05997 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC25.62■■□□□ 1.69
COL5A2P05997 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL5A2P05997 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
COL5A2P05997 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
COL5A2P05997 AC111152.3-201ENST00000569699 673 ntBASIC25.61■■□□□ 1.69
COL5A2P05997 MIR3652-201ENST00000579335 131 ntBASIC25.61■■□□□ 1.69
COL5A2P05997 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL5A2P05997 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL5A2P05997 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL5A2P05997 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL5A2P05997 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.61■■□□□ 1.69
COL5A2P05997 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
COL5A2P05997 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC25.6■■□□□ 1.69
COL5A2P05997 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
COL5A2P05997 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.6■■□□□ 1.69
COL5A2P05997 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC25.6■■□□□ 1.69
COL5A2P05997 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
COL5A2P05997 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL5A2P05997 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.6■■□□□ 1.69
COL5A2P05997 RASA4DP-201ENST00000460726 1199 ntBASIC25.6■■□□□ 1.69
COL5A2P05997 AC092597.1-201ENST00000487352 616 ntBASIC25.6■■□□□ 1.69
COL5A2P05997 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
COL5A2P05997 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC25.6■■□□□ 1.69
COL5A2P05997 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL5A2P05997 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL5A2P05997 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL5A2P05997 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL5A2P05997 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL5A2P05997 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC25.59■■□□□ 1.69
COL5A2P05997 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.59■■□□□ 1.69
COL5A2P05997 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL5A2P05997 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
COL5A2P05997 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL5A2P05997 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
COL5A2P05997 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL5A2P05997 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL5A2P05997 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.58■■□□□ 1.69
COL5A2P05997 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.58■■□□□ 1.69
COL5A2P05997 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
COL5A2P05997 BUB3-202ENST00000368859 667 ntTSL 3 BASIC25.58■■□□□ 1.69
COL5A2P05997 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC25.58■■□□□ 1.69
COL5A2P05997 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
COL5A2P05997 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
COL5A2P05997 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL5A2P05997 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL5A2P05997 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL5A2P05997 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL5A2P05997 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.58■■□□□ 1.68
COL5A2P05997 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.68
COL5A2P05997 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL5A2P05997 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
COL5A2P05997 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
COL5A2P05997 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC25.57■■□□□ 1.68
COL5A2P05997 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL5A2P05997 KRT8P10-201ENST00000450021 1447 ntBASIC25.57■■□□□ 1.68
COL5A2P05997 KRT17P6-201ENST00000453795 1220 ntBASIC25.57■■□□□ 1.68
COL5A2P05997 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL5A2P05997 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC25.57■■□□□ 1.68
COL5A2P05997 AC092329.2-201ENST00000598402 547 ntBASIC25.57■■□□□ 1.68
COL5A2P05997 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 AC079834.2-201ENST00000609776 1949 ntBASIC25.56■■□□□ 1.68
COL5A2P05997 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC25.56■■□□□ 1.68
COL5A2P05997 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
COL5A2P05997 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC25.56■■□□□ 1.68
COL5A2P05997 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 AP002383.4-201ENST00000442518 975 ntBASIC25.56■■□□□ 1.68
COL5A2P05997 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
COL5A2P05997 UNC93B7-201ENST00000509439 705 ntBASIC25.56■■□□□ 1.68
COL5A2P05997 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL5A2P05997 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
COL5A2P05997 WDR6-223ENST00000627177 207 ntTSL 2 BASIC25.56■■□□□ 1.68
COL5A2P05997 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
COL5A2P05997 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
COL5A2P05997 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
COL5A2P05997 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
COL5A2P05997 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
COL5A2P05997 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL5A2P05997 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
COL5A2P05997 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL5A2P05997 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL5A2P05997 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms