Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.42■□□□□ 0.38
HLA-DPB1P04440 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 AC090192.1-201ENST00000517740 490 ntBASIC17.41■□□□□ 0.38
HLA-DPB1P04440 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 AL356652.1-201ENST00000615962 565 ntBASIC17.41■□□□□ 0.38
HLA-DPB1P04440 OR10C1-204ENST00000622521 1039 ntBASIC17.41■□□□□ 0.38
HLA-DPB1P04440 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPB1P04440 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 AL355472.2-201ENST00000422958 438 ntBASIC17.4■□□□□ 0.38
HLA-DPB1P04440 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.4■□□□□ 0.38
HLA-DPB1P04440 AC105036.2-201ENST00000569468 176 ntBASIC17.4■□□□□ 0.38
HLA-DPB1P04440 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.4■□□□□ 0.38
HLA-DPB1P04440 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPB1P04440 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DPB1P04440 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DPB1P04440 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DPB1P04440 KRT8P17-201ENST00000453110 1448 ntBASIC17.39■□□□□ 0.38
HLA-DPB1P04440 AC010980.2-201ENST00000587099 1412 ntBASIC17.39■□□□□ 0.38
HLA-DPB1P04440 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 AF201337.1-201ENST00000520239 748 ntBASIC17.39■□□□□ 0.37
HLA-DPB1P04440 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 AC133552.2-202ENST00000575694 574 ntBASIC17.39■□□□□ 0.37
HLA-DPB1P04440 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DPB1P04440 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DPB1P04440 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms