Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.73■□□□□ 0.43
P04436 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.73■□□□□ 0.43
P04436 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.73■□□□□ 0.43
P04436 AC133561.5-201ENST00000635547 218 ntBASIC17.73■□□□□ 0.43
P04436 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.73■□□□□ 0.43
P04436 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.73■□□□□ 0.43
P04436 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.73■□□□□ 0.43
P04436 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
P04436 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04436 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.73■□□□□ 0.43
P04436 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
P04436 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
P04436 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 AC079598.2-202ENST00000546624 1451 ntBASIC17.72■□□□□ 0.43
P04436 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.72■□□□□ 0.43
P04436 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.72■□□□□ 0.43
P04436 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
P04436 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.72■□□□□ 0.43
P04436 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.72■□□□□ 0.43
P04436 DGCR10-201ENST00000609839 495 ntBASIC17.72■□□□□ 0.43
P04436 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.72■□□□□ 0.43
P04436 AC011298.2-201ENST00000617989 482 ntBASIC17.72■□□□□ 0.43
P04436 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.72■□□□□ 0.43
P04436 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
P04436 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.72■□□□□ 0.43
P04436 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04436 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
P04436 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.71■□□□□ 0.43
P04436 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.71■□□□□ 0.43
P04436 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 RCC2P6-201ENST00000526625 1557 ntBASIC17.71■□□□□ 0.43
P04436 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.71■□□□□ 0.43
P04436 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 ECEL1P3-201ENST00000427961 737 ntBASIC17.71■□□□□ 0.43
P04436 AC011506.1-201ENST00000474329 610 ntBASIC17.71■□□□□ 0.43
P04436 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.71■□□□□ 0.43
P04436 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.71■□□□□ 0.43
P04436 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.71■□□□□ 0.43
P04436 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
P04436 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.71■□□□□ 0.43
P04436 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.71■□□□□ 0.43
P04436 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.71■□□□□ 0.43
P04436 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.71■□□□□ 0.43
P04436 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
P04436 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04436 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
P04436 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
P04436 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
P04436 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.7■□□□□ 0.42
P04436 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.7■□□□□ 0.42
P04436 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.7■□□□□ 0.42
P04436 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
P04436 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
P04436 MESTP1-201ENST00000404287 994 ntBASIC17.7■□□□□ 0.42
P04436 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.7■□□□□ 0.42
P04436 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04436 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms