Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.67■■□□□ 1.22
CTNND1O60716 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.67■■□□□ 1.22
CTNND1O60716 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CTNND1O60716 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CTNND1O60716 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CTNND1O60716 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CTNND1O60716 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CTNND1O60716 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CTNND1O60716 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CTNND1O60716 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CTNND1O60716 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.66■■□□□ 1.22
CTNND1O60716 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
CTNND1O60716 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CTNND1O60716 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CTNND1O60716 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CTNND1O60716 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.66■■□□□ 1.22
CTNND1O60716 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.66■■□□□ 1.22
CTNND1O60716 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CTNND1O60716 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.66■■□□□ 1.22
CTNND1O60716 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.66■■□□□ 1.22
CTNND1O60716 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.66■■□□□ 1.22
CTNND1O60716 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.66■■□□□ 1.22
CTNND1O60716 AC140113.3-201ENST00000605663 199 ntBASIC22.66■■□□□ 1.22
CTNND1O60716 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.66■■□□□ 1.22
CTNND1O60716 AP000550.4-202ENST00000639755 178 ntBASIC22.66■■□□□ 1.22
CTNND1O60716 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.66■■□□□ 1.22
CTNND1O60716 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CTNND1O60716 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.66■■□□□ 1.22
CTNND1O60716 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CTNND1O60716 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.66■■□□□ 1.22
CTNND1O60716 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CTNND1O60716 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CTNND1O60716 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CTNND1O60716 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CTNND1O60716 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.65■■□□□ 1.22
CTNND1O60716 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTNND1O60716 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTNND1O60716 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CTNND1O60716 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CTNND1O60716 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
CTNND1O60716 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTNND1O60716 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTNND1O60716 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTNND1O60716 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.65■■□□□ 1.22
CTNND1O60716 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.65■■□□□ 1.22
CTNND1O60716 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.65■■□□□ 1.22
CTNND1O60716 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.65■■□□□ 1.22
CTNND1O60716 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.65■■□□□ 1.22
CTNND1O60716 AL121956.5-201ENST00000625261 221 ntBASIC22.65■■□□□ 1.22
CTNND1O60716 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTNND1O60716 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CTNND1O60716 AL691432.2-201ENST00000607222 2038 ntBASIC22.65■■□□□ 1.22
CTNND1O60716 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTNND1O60716 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.65■■□□□ 1.22
CTNND1O60716 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.65■■□□□ 1.22
CTNND1O60716 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CTNND1O60716 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.64■■□□□ 1.22
CTNND1O60716 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CTNND1O60716 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CTNND1O60716 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTNND1O60716 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CTNND1O60716 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.64■■□□□ 1.21
CTNND1O60716 AL441883.1-201ENST00000566170 1045 ntBASIC22.64■■□□□ 1.21
CTNND1O60716 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CTNND1O60716 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.64■■□□□ 1.21
CTNND1O60716 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CTNND1O60716 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CTNND1O60716 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTNND1O60716 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CTNND1O60716 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CTNND1O60716 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.64■■□□□ 1.21
CTNND1O60716 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTNND1O60716 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CTNND1O60716 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CTNND1O60716 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CTNND1O60716 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTNND1O60716 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CTNND1O60716 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.63■■□□□ 1.21
CTNND1O60716 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CTNND1O60716 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.63■■□□□ 1.21
CTNND1O60716 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTNND1O60716 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTNND1O60716 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.63■■□□□ 1.21
CTNND1O60716 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.63■■□□□ 1.21
CTNND1O60716 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.63■■□□□ 1.21
CTNND1O60716 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTNND1O60716 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CTNND1O60716 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.63■■□□□ 1.21
CTNND1O60716 FAM86EP-206ENST00000510506 987 ntBASIC22.63■■□□□ 1.21
CTNND1O60716 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CTNND1O60716 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.63■■□□□ 1.21
CTNND1O60716 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.63■■□□□ 1.21
CTNND1O60716 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CTNND1O60716 AL023973.1-201ENST00000624619 620 ntBASIC22.63■■□□□ 1.21
CTNND1O60716 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.63■■□□□ 1.21
CTNND1O60716 AC073314.1-201ENST00000568729 2216 ntBASIC22.63■■□□□ 1.21
CTNND1O60716 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CTNND1O60716 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTNND1O60716 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CTNND1O60716 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms