Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
PCDH7O60245 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH7O60245 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH7O60245 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH7O60245 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDH7O60245 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDH7O60245 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDH7O60245 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDH7O60245 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PCDH7O60245 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDH7O60245 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDH7O60245 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 KRT18P16-201ENST00000510337 1294 ntBASIC18.5■□□□□ 0.55
PCDH7O60245 RNA5SP413-201ENST00000516373 109 ntBASIC18.5■□□□□ 0.55
PCDH7O60245 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.5■□□□□ 0.55
PCDH7O60245 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PCDH7O60245 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDH7O60245 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH7O60245 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH7O60245 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDH7O60245 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDH7O60245 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 TUBB8P6-201ENST00000436895 1288 ntBASIC18.49■□□□□ 0.55
PCDH7O60245 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDH7O60245 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH7O60245 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDH7O60245 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDH7O60245 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
PCDH7O60245 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDH7O60245 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDH7O60245 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH7O60245 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDH7O60245 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PCDH7O60245 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH7O60245 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.48■□□□□ 0.55
PCDH7O60245 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH7O60245 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDH7O60245 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH7O60245 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDH7O60245 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDH7O60245 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDH7O60245 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH7O60245 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDH7O60245 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDH7O60245 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDH7O60245 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDH7O60245 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms