Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.85■□□□□ 0.61
PEX1O43933 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.85■□□□□ 0.61
PEX1O43933 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.85■□□□□ 0.61
PEX1O43933 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 MCRIP2P1-201ENST00000394346 511 ntBASIC18.85■□□□□ 0.61
PEX1O43933 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PEX1O43933 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.85■□□□□ 0.61
PEX1O43933 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PEX1O43933 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.85■□□□□ 0.61
PEX1O43933 CYP2T3P-201ENST00000601990 817 ntBASIC18.85■□□□□ 0.61
PEX1O43933 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.85■□□□□ 0.61
PEX1O43933 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PEX1O43933 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
PEX1O43933 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 BX119927.1-201ENST00000636596 1552 ntBASIC18.85■□□□□ 0.61
PEX1O43933 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PEX1O43933 KRT17P1-201ENST00000399211 1546 ntBASIC18.84■□□□□ 0.61
PEX1O43933 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX1O43933 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PEX1O43933 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.84■□□□□ 0.61
PEX1O43933 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.84■□□□□ 0.61
PEX1O43933 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX1O43933 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.84■□□□□ 0.61
PEX1O43933 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX1O43933 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.84■□□□□ 0.61
PEX1O43933 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.84■□□□□ 0.61
PEX1O43933 MIR2861-201ENST00000636310 90 ntBASIC18.84■□□□□ 0.61
PEX1O43933 AL390961.4-201ENST00000623958 2535 ntBASIC18.84■□□□□ 0.61
PEX1O43933 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PEX1O43933 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.84■□□□□ 0.61
PEX1O43933 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.84■□□□□ 0.61
PEX1O43933 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PEX1O43933 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.84■□□□□ 0.61
PEX1O43933 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PEX1O43933 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PEX1O43933 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PEX1O43933 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PEX1O43933 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.83■□□□□ 0.61
PEX1O43933 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PEX1O43933 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PEX1O43933 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PEX1O43933 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PEX1O43933 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PEX1O43933 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PEX1O43933 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PEX1O43933 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.83■□□□□ 0.6
PEX1O43933 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.83■□□□□ 0.6
PEX1O43933 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.83■□□□□ 0.6
PEX1O43933 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.83■□□□□ 0.6
PEX1O43933 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.83■□□□□ 0.6
PEX1O43933 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.83■□□□□ 0.6
PEX1O43933 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.83■□□□□ 0.6
PEX1O43933 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.83■□□□□ 0.6
PEX1O43933 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.83■□□□□ 0.6
PEX1O43933 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PEX1O43933 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.83■□□□□ 0.6
PEX1O43933 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 AC116050.2-201ENST00000612102 1779 ntBASIC18.83■□□□□ 0.6
PEX1O43933 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PEX1O43933 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.82■□□□□ 0.6
PEX1O43933 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
PEX1O43933 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.82■□□□□ 0.6
PEX1O43933 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX1O43933 AC135050.7-201ENST00000624508 2218 ntBASIC18.82■□□□□ 0.6
PEX1O43933 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX1O43933 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX1O43933 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX1O43933 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PEX1O43933 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms