Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 Z85996.1-201ENST00000494644 937 ntBASIC19.71■□□□□ 0.75
KDELR3O43731 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.71■□□□□ 0.75
KDELR3O43731 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.71■□□□□ 0.75
KDELR3O43731 AP003071.4-201ENST00000562276 1284 ntBASIC19.71■□□□□ 0.75
KDELR3O43731 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KDELR3O43731 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.71■□□□□ 0.75
KDELR3O43731 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.71■□□□□ 0.75
KDELR3O43731 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.71■□□□□ 0.75
KDELR3O43731 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.71■□□□□ 0.75
KDELR3O43731 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
KDELR3O43731 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.71■□□□□ 0.75
KDELR3O43731 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KDELR3O43731 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
KDELR3O43731 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.7■□□□□ 0.74
KDELR3O43731 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
KDELR3O43731 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KDELR3O43731 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.7■□□□□ 0.74
KDELR3O43731 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.7■□□□□ 0.74
KDELR3O43731 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.7■□□□□ 0.74
KDELR3O43731 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.7■□□□□ 0.74
KDELR3O43731 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.7■□□□□ 0.74
KDELR3O43731 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.7■□□□□ 0.74
KDELR3O43731 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KDELR3O43731 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.7■□□□□ 0.74
KDELR3O43731 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.7■□□□□ 0.74
KDELR3O43731 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KDELR3O43731 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KDELR3O43731 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KDELR3O43731 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KDELR3O43731 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KDELR3O43731 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KDELR3O43731 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KDELR3O43731 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KDELR3O43731 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.7■□□□□ 0.74
KDELR3O43731 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
KDELR3O43731 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.69■□□□□ 0.74
KDELR3O43731 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KDELR3O43731 FSCN1P1-201ENST00000568912 1481 ntBASIC19.69■□□□□ 0.74
KDELR3O43731 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KDELR3O43731 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KDELR3O43731 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.69■□□□□ 0.74
KDELR3O43731 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.69■□□□□ 0.74
KDELR3O43731 AC011506.1-201ENST00000474329 610 ntBASIC19.69■□□□□ 0.74
KDELR3O43731 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.69■□□□□ 0.74
KDELR3O43731 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.69■□□□□ 0.74
KDELR3O43731 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.69■□□□□ 0.74
KDELR3O43731 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.69■□□□□ 0.74
KDELR3O43731 REXO1L10P-201ENST00000615707 1290 ntBASIC19.69■□□□□ 0.74
KDELR3O43731 MIR6786-201ENST00000616843 113 ntBASIC19.69■□□□□ 0.74
KDELR3O43731 REXO1L12P-201ENST00000622156 912 ntBASIC19.69■□□□□ 0.74
KDELR3O43731 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
KDELR3O43731 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
KDELR3O43731 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KDELR3O43731 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.69■□□□□ 0.74
KDELR3O43731 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KDELR3O43731 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.69■□□□□ 0.74
KDELR3O43731 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KDELR3O43731 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KDELR3O43731 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
KDELR3O43731 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KDELR3O43731 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KDELR3O43731 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.68■□□□□ 0.74
KDELR3O43731 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KDELR3O43731 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KDELR3O43731 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
KDELR3O43731 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KDELR3O43731 MESTP1-201ENST00000404287 994 ntBASIC19.68■□□□□ 0.74
KDELR3O43731 B3GAT3P1-201ENST00000471720 806 ntBASIC19.68■□□□□ 0.74
KDELR3O43731 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.68■□□□□ 0.74
KDELR3O43731 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.68■□□□□ 0.74
KDELR3O43731 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
KDELR3O43731 AC130371.2-201ENST00000619443 611 ntBASIC19.68■□□□□ 0.74
KDELR3O43731 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.68■□□□□ 0.74
KDELR3O43731 RCC2P6-201ENST00000526625 1557 ntBASIC19.68■□□□□ 0.74
KDELR3O43731 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.68■□□□□ 0.74
KDELR3O43731 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KDELR3O43731 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.68■□□□□ 0.74
KDELR3O43731 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KDELR3O43731 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KDELR3O43731 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KDELR3O43731 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.67■□□□□ 0.74
KDELR3O43731 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
KDELR3O43731 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KDELR3O43731 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KDELR3O43731 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
KDELR3O43731 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.67■□□□□ 0.74
KDELR3O43731 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
KDELR3O43731 AC004951.3-201ENST00000418645 1148 ntBASIC19.67■□□□□ 0.74
KDELR3O43731 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.67■□□□□ 0.74
KDELR3O43731 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KDELR3O43731 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
KDELR3O43731 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.67■□□□□ 0.74
KDELR3O43731 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms