Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.27■□□□□ 0.68
PHGDHO43175 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHGDHO43175 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHGDHO43175 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.27■□□□□ 0.68
PHGDHO43175 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHGDHO43175 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.27■□□□□ 0.68
PHGDHO43175 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.27■□□□□ 0.68
PHGDHO43175 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.27■□□□□ 0.68
PHGDHO43175 MIR4758-201ENST00000577688 71 ntBASIC19.27■□□□□ 0.68
PHGDHO43175 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.27■□□□□ 0.68
PHGDHO43175 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHGDHO43175 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHGDHO43175 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHGDHO43175 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHGDHO43175 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.26■□□□□ 0.67
PHGDHO43175 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PHGDHO43175 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PHGDHO43175 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.26■□□□□ 0.67
PHGDHO43175 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.26■□□□□ 0.67
PHGDHO43175 AC097658.1-201ENST00000475555 843 ntBASIC19.26■□□□□ 0.67
PHGDHO43175 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.26■□□□□ 0.67
PHGDHO43175 AL138781.1-201ENST00000566567 1274 ntBASIC19.26■□□□□ 0.67
PHGDHO43175 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.26■□□□□ 0.67
PHGDHO43175 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.26■□□□□ 0.67
PHGDHO43175 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.26■□□□□ 0.67
PHGDHO43175 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.26■□□□□ 0.67
PHGDHO43175 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.26■□□□□ 0.67
PHGDHO43175 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PHGDHO43175 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHGDHO43175 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHGDHO43175 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PHGDHO43175 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHGDHO43175 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.25■□□□□ 0.67
PHGDHO43175 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHGDHO43175 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.25■□□□□ 0.67
PHGDHO43175 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PHGDHO43175 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHGDHO43175 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHGDHO43175 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.25■□□□□ 0.67
PHGDHO43175 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.25■□□□□ 0.67
PHGDHO43175 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.25■□□□□ 0.67
PHGDHO43175 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.25■□□□□ 0.67
PHGDHO43175 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.25■□□□□ 0.67
PHGDHO43175 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.25■□□□□ 0.67
PHGDHO43175 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.25■□□□□ 0.67
PHGDHO43175 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.25■□□□□ 0.67
PHGDHO43175 HLA-B-256ENST00000639848 1089 ntBASIC19.25■□□□□ 0.67
PHGDHO43175 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
PHGDHO43175 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHGDHO43175 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PHGDHO43175 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PHGDHO43175 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PHGDHO43175 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.25■□□□□ 0.67
PHGDHO43175 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
PHGDHO43175 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.24■□□□□ 0.67
PHGDHO43175 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.24■□□□□ 0.67
PHGDHO43175 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.24■□□□□ 0.67
PHGDHO43175 AC141586.3-201ENST00000562166 1838 ntBASIC19.24■□□□□ 0.67
PHGDHO43175 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.24■□□□□ 0.67
PHGDHO43175 PNMA6B-201ENST00000538162 1200 ntBASIC19.24■□□□□ 0.67
PHGDHO43175 AC083880.1-201ENST00000608266 535 ntBASIC19.24■□□□□ 0.67
PHGDHO43175 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.24■□□□□ 0.67
PHGDHO43175 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.24■□□□□ 0.67
PHGDHO43175 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
PHGDHO43175 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.24■□□□□ 0.67
PHGDHO43175 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.24■□□□□ 0.67
PHGDHO43175 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHGDHO43175 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms