Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 ZNF815P-204ENST00000434898 1737 ntBASIC18.49■□□□□ 0.55
RTCAO00442 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RTCAO00442 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.49■□□□□ 0.55
RTCAO00442 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.49■□□□□ 0.55
RTCAO00442 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTCAO00442 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.49■□□□□ 0.55
RTCAO00442 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.49■□□□□ 0.55
RTCAO00442 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.49■□□□□ 0.55
RTCAO00442 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.49■□□□□ 0.55
RTCAO00442 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.49■□□□□ 0.55
RTCAO00442 ITM2C-210ENST00000620962 501 ntBASIC18.49■□□□□ 0.55
RTCAO00442 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 LINC01465-201ENST00000408887 1940 ntBASIC18.49■□□□□ 0.55
RTCAO00442 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.49■□□□□ 0.55
RTCAO00442 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.49■□□□□ 0.55
RTCAO00442 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTCAO00442 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
RTCAO00442 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.48■□□□□ 0.55
RTCAO00442 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
RTCAO00442 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.48■□□□□ 0.55
RTCAO00442 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.48■□□□□ 0.55
RTCAO00442 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RTCAO00442 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.48■□□□□ 0.55
RTCAO00442 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RTCAO00442 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RTCAO00442 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RTCAO00442 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.48■□□□□ 0.55
RTCAO00442 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
RTCAO00442 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RTCAO00442 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RTCAO00442 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTCAO00442 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.48■□□□□ 0.55
RTCAO00442 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 PRORSD1P-201ENST00000295112 541 ntBASIC18.47■□□□□ 0.55
RTCAO00442 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RTCAO00442 RPPH1-201ENST00000516869 333 ntBASIC18.47■□□□□ 0.55
RTCAO00442 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.47■□□□□ 0.55
RTCAO00442 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.47■□□□□ 0.55
RTCAO00442 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.47■□□□□ 0.55
RTCAO00442 AC004264.1-201ENST00000608354 794 ntBASIC18.47■□□□□ 0.55
RTCAO00442 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RTCAO00442 AC120498.9-201ENST00000339021 3867 ntBASIC18.47■□□□□ 0.55
RTCAO00442 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.47■□□□□ 0.55
RTCAO00442 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.47■□□□□ 0.55
RTCAO00442 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTCAO00442 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.47■□□□□ 0.55
RTCAO00442 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.47■□□□□ 0.55
RTCAO00442 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.47■□□□□ 0.55
RTCAO00442 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RTCAO00442 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.46■□□□□ 0.55
RTCAO00442 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RTCAO00442 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RTCAO00442 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.46■□□□□ 0.55
RTCAO00442 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.46■□□□□ 0.55
RTCAO00442 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTCAO00442 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.46■□□□□ 0.55
RTCAO00442 ABHD17AP1-201ENST00000358206 933 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms