Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.95■□□□□ 0.62
TAF4O00268 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TAF4O00268 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 INGX-201ENST00000359239 846 ntBASIC18.95■□□□□ 0.62
TAF4O00268 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.95■□□□□ 0.62
TAF4O00268 CLEC4GP1-201ENST00000596555 870 ntBASIC18.95■□□□□ 0.62
TAF4O00268 AC004264.1-201ENST00000608354 794 ntBASIC18.95■□□□□ 0.62
TAF4O00268 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TAF4O00268 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TAF4O00268 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.95■□□□□ 0.62
TAF4O00268 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TAF4O00268 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TAF4O00268 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TAF4O00268 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 TSPY14P-201ENST00000303979 915 ntBASIC18.94■□□□□ 0.62
TAF4O00268 PCED1CP-201ENST00000419887 785 ntBASIC18.94■□□□□ 0.62
TAF4O00268 KSR1P1-201ENST00000446298 240 ntBASIC18.94■□□□□ 0.62
TAF4O00268 FAM86EP-206ENST00000510506 987 ntBASIC18.94■□□□□ 0.62
TAF4O00268 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.94■□□□□ 0.62
TAF4O00268 C2orf69P3-201ENST00000565542 1120 ntBASIC18.94■□□□□ 0.62
TAF4O00268 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 AC093458.2-201ENST00000623150 629 ntBASIC18.94■□□□□ 0.62
TAF4O00268 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.94■□□□□ 0.62
TAF4O00268 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.94■□□□□ 0.62
TAF4O00268 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.94■□□□□ 0.62
TAF4O00268 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.94■□□□□ 0.62
TAF4O00268 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TAF4O00268 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TAF4O00268 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.94■□□□□ 0.62
TAF4O00268 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.93■□□□□ 0.62
TAF4O00268 AC087289.5-201ENST00000586076 3175 ntBASIC18.93■□□□□ 0.62
TAF4O00268 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TAF4O00268 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TAF4O00268 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.93■□□□□ 0.62
TAF4O00268 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.93■□□□□ 0.62
TAF4O00268 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.93■□□□□ 0.62
TAF4O00268 AC139887.4-201ENST00000607877 719 ntBASIC18.93■□□□□ 0.62
TAF4O00268 AL691432.3-201ENST00000621860 400 ntBASIC18.93■□□□□ 0.62
TAF4O00268 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.93■□□□□ 0.62
TAF4O00268 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.93■□□□□ 0.62
TAF4O00268 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
TAF4O00268 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TAF4O00268 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
TAF4O00268 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 KRT16P1-201ENST00000399124 1418 ntBASIC18.92■□□□□ 0.62
TAF4O00268 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TAF4O00268 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.92■□□□□ 0.62
TAF4O00268 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TAF4O00268 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TAF4O00268 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TAF4O00268 RNF152P1-201ENST00000397754 604 ntBASIC18.92■□□□□ 0.62
TAF4O00268 NIFKP9-201ENST00000419265 221 ntBASIC18.92■□□□□ 0.62
TAF4O00268 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.92■□□□□ 0.62
TAF4O00268 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TAF4O00268 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms