Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 AC034232.1-201ENST00000506026 1064 ntBASIC18.56■□□□□ 0.56
CNOT1A5YKK6 AL121912.1-201ENST00000603683 238 ntBASIC18.56■□□□□ 0.56
CNOT1A5YKK6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 AL590627.1-203ENST00000421194 1026 ntBASIC18.55■□□□□ 0.56
CNOT1A5YKK6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 TPSP2-201ENST00000561760 610 ntBASIC18.55■□□□□ 0.56
CNOT1A5YKK6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 AL139424.1-201ENST00000607572 797 ntBASIC18.55■□□□□ 0.56
CNOT1A5YKK6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.55■□□□□ 0.56
CNOT1A5YKK6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 AP002414.4-201ENST00000589764 1148 ntBASIC18.55■□□□□ 0.56
CNOT1A5YKK6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT1A5YKK6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 TSSC2-201ENST00000450217 709 ntBASIC18.54■□□□□ 0.56
CNOT1A5YKK6 AP000867.3-201ENST00000524675 377 ntBASIC18.54■□□□□ 0.56
CNOT1A5YKK6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.54■□□□□ 0.56
CNOT1A5YKK6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 AC079776.4-201ENST00000511039 504 ntBASIC18.53■□□□□ 0.56
CNOT1A5YKK6 POLD2P1-201ENST00000511220 997 ntBASIC18.53■□□□□ 0.56
CNOT1A5YKK6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.53■□□□□ 0.56
CNOT1A5YKK6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 ECEL1P1-201ENST00000373592 1742 ntBASIC18.52■□□□□ 0.56
CNOT1A5YKK6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 AL773604.1-201ENST00000617417 272 ntBASIC18.52■□□□□ 0.56
CNOT1A5YKK6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNOT1A5YKK6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNOT1A5YKK6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms