Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 PABPC1P6-201ENST00000445594 1829 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 NCLP2-201ENST00000416078 1462 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 RNA5SP183-201ENST00000362452 119 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 RN7SKP149-201ENST00000363008 344 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 RNA5SP30-201ENST00000365552 115 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 RNU4-2-201ENST00000365668 141 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 RPL31P52-201ENST00000407532 367 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC016907.1-201ENST00000419483 435 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 NIPA2P1-201ENST00000426223 976 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 MED14P1-201ENST00000430517 648 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 VN1R108P-201ENST00000431580 830 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 MTND4P6-201ENST00000438297 472 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 MTCO1P48-201ENST00000448024 1096 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 SLC31A1P1-201ENST00000451221 567 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC004129.2-201ENST00000457229 287 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 OR52A4P-201ENST00000472867 958 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC072039.1-201ENST00000477611 581 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 RPL7P39-201ENST00000481157 744 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 RPS6P4-201ENST00000494693 758 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 MTND5P13-201ENST00000513046 1079 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC110743.1-201ENST00000584870 478 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 SUGT1P3-202ENST00000604259 383 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AL512329.2-201ENST00000607350 548 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 Z95327.3-201ENST00000610385 572 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 HULC.1-201ENST00000612720 240 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AL031667.3-201ENST00000620124 655 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 PCMTD1P7-201ENST00000634506 357 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 AP004607.3-201ENST00000530354 3915 ntBASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHGA6Q9Y5G7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AL079343.1-201ENST00000572358 1771 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 CR381670.1-201ENST00000624291 1693 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 RNU6-500P-201ENST00000362349 107 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 RNA5SP234-201ENST00000363916 119 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 SNORA74A-201ENST00000364089 198 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 Y_RNA.318-201ENST00000365131 97 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 RNU1-136P-201ENST00000384181 164 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 RNU6-171P-201ENST00000384354 107 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 ATP5F1P4-201ENST00000397288 746 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 RNU6-920P-201ENST00000410926 92 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 RPS26P47-201ENST00000427219 348 ntBASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA6Q9Y5G7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms