Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SIN3AQ96ST3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
SIN3AQ96ST3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 NEAT1-202ENST00000501122 22743 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AC108032.1-201ENST00000416706 207 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 RPL17P35-201ENST00000432217 549 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AL162151.2-201ENST00000448875 158 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 MTND5P8-201ENST00000449817 1083 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 RPL29P14-201ENST00000495837 428 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 RNU4-89P-201ENST00000607443 133 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AC016717.3-201ENST00000624730 554 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 AC080188.3-201ENST00000624842 748 ntBASIC5.83□□□□□ -1.48
SIN3AQ96ST3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIN3AQ96ST3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 CASC19-261ENST00000641853 1638 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 AC019072.1-201ENST00000604535 1551 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 AC091046.3-201ENST00000631455 1574 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 HMGB3P19-201ENST00000403971 560 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 GTF2IP2-201ENST00000424290 697 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 ELOCP3-201ENST00000439303 348 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 SETP12-201ENST00000514068 805 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 SEC11B-201ENST00000518383 499 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 IGKV2D-10-201ENST00000520194 281 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 AC069240.1-201ENST00000548774 375 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 LINC00557-201ENST00000563184 1279 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 AC084036.1-201ENST00000609190 508 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 AC023043.4-201ENST00000612081 449 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 AL731566.2-201ENST00000618971 317 ntBASIC5.82□□□□□ -1.48
SIN3AQ96ST3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SIN3AQ96ST3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 OR13Z1P-201ENST00000416141 834 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC013470.3-201ENST00000420252 1194 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 MTND4LP7-201ENST00000431728 294 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC022795.1-201ENST00000473808 480 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AL132838.2-201ENST00000492041 314 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 RNU6-352P-201ENST00000516908 107 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 SETP1-201ENST00000556014 845 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 MTND4LP25-201ENST00000570218 163 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC091167.4-201ENST00000605079 184 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AL138960.2-201ENST00000625145 535 ntBASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.81□□□□□ -1.48
SIN3AQ96ST3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SIN3AQ96ST3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SIN3AQ96ST3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SIN3AQ96ST3 RNA5SP306-201ENST00000411087 107 ntBASIC5.8□□□□□ -1.48
SIN3AQ96ST3 TRIM60P17-201ENST00000415181 719 ntBASIC5.8□□□□□ -1.48
SIN3AQ96ST3 AL691449.1-201ENST00000426570 421 ntBASIC5.8□□□□□ -1.48
SIN3AQ96ST3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.8□□□□□ -1.48
SIN3AQ96ST3 MTND4LP14-201ENST00000429447 288 ntBASIC5.8□□□□□ -1.48
SIN3AQ96ST3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.8□□□□□ -1.48
SIN3AQ96ST3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.8□□□□□ -1.48
SIN3AQ96ST3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.8□□□□□ -1.48
SIN3AQ96ST3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.8□□□□□ -1.48
SIN3AQ96ST3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.8□□□□□ -1.48
SIN3AQ96ST3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.8□□□□□ -1.48
SIN3AQ96ST3 RNA5SP179-201ENST00000517284 121 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms