Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC243428.1-201ENST00000421099 264 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AL354707.3-201ENST00000427308 331 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 PSMA6P3-201ENST00000428242 164 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 YWHAZP8-201ENST00000436935 731 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AL450996.1-201ENST00000445574 1202 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 HLA-DPA3-207ENST00000454398 229 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 RPS20P32-201ENST00000456044 356 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 RNU6-256P-201ENST00000516747 97 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AP005639.1-201ENST00000526939 192 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AP003385.6-201ENST00000531603 374 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC022080.3-201ENST00000544433 482 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 CYCSP38-201ENST00000559840 322 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC138761.3-201ENST00000579993 334 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AL354984.3-201ENST00000604803 325 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 MIR6748-201ENST00000610433 71 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 AL021879.1-201ENST00000611756 288 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 EIF3FP1-201ENST00000613970 806 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 OR2A20P-201ENST00000479887 2913 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AP004289.1-201ENST00000436307 2205 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC119744.1-201ENST00000454746 1715 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.46□□□□□ -1.21
LRCH3Q96II8 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.21
LRCH3Q96II8 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LRCH3Q96II8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LRCH3Q96II8 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
LRCH3Q96II8 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LRCH3Q96II8 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.21
LRCH3Q96II8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 RNU6-666P-201ENST00000363499 107 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 Y_RNA.378-201ENST00000365652 113 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 RNU6-662P-201ENST00000384253 104 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 RNU6-532P-201ENST00000384318 107 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 SNORA68-201ENST00000384437 133 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 RPL7P60-201ENST00000397636 735 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 RPS4XP9-201ENST00000405151 780 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 PRELID3BP11-201ENST00000414230 479 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 ANKRD54P1-201ENST00000433115 471 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 RPS20P5-201ENST00000434808 360 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC092013.1-201ENST00000438795 332 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 RPL21P2-201ENST00000440049 481 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 MED28P3-201ENST00000444288 531 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 SNORA81.1-201ENST00000458922 177 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 RPL35AP28-201ENST00000459730 331 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC068228.1-201ENST00000461723 211 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 RPL7L1P8-201ENST00000469911 741 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 HIGD1AP6-201ENST00000521833 279 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms