Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 VWA8P1-201ENST00000510889 176 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 AF279873.1-201ENST00000523393 313 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 MTND2P26-201ENST00000528255 1029 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTP4A1Q93096 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 AL049839.1-201ENST00000556151 657 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC079075.1-201ENST00000559543 878 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 MTND4LP25-201ENST00000570218 163 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 MIR3691-201ENST00000578066 90 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC103792.1-201ENST00000603591 919 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC026741.1-201ENST00000605892 482 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC019206.1-201ENST00000621938 425 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 AP002799.1-201ENST00000623552 423 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 AC068620.4-201ENST00000636730 1182 ntBASIC4.33□□□□□ -1.72
PTP4A1Q93096 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTP4A1Q93096 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.33□□□□□ -1.72
PTP4A1Q93096 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTP4A1Q93096 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTP4A1Q93096 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC108751.5-201ENST00000492880 1336 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC016716.1-201ENST00000265882 708 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 ARL4AP5-201ENST00000404372 599 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AL080315.1-201ENST00000406055 466 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 RNU6-77P-201ENST00000410554 91 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 RN7SKP177-201ENST00000410567 355 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC069218.2-201ENST00000411665 344 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 USP9YP19-201ENST00000412165 485 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AL445183.3-201ENST00000414168 502 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 VN1R37P-201ENST00000419096 748 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 UBE2D3P3-201ENST00000426992 425 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 RHOT1P3-201ENST00000436571 331 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC092647.3-201ENST00000443044 633 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC073850.1-201ENST00000449243 255 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 TPT1P13-201ENST00000449760 499 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 RPL23AP56-201ENST00000460778 453 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 RPS4XP6-201ENST00000477670 797 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 RPSAP50-201ENST00000481955 852 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC093270.2-201ENST00000486157 792 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 MRPS33P2-201ENST00000507850 322 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC004980.4-201ENST00000513375 203 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC104115.2-201ENST00000523026 687 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 GSTP1P1-201ENST00000548078 319 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC098483.2-201ENST00000603158 454 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC093799.2-201ENST00000610062 578 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC084824.5-201ENST00000612009 413 ntBASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTP4A1Q93096 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
PTP4A1Q93096 MAPK10-303ENST00000641324 3959 ntBASIC4.31□□□□□ -1.72
PTP4A1Q93096 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTP4A1Q93096 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTP4A1Q93096 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTP4A1Q93096 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms