Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC006504.8-201ENST00000621046 635 ntBASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 AL049767.1-202ENST00000637826 242 ntBASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHKBP1Q8TBC3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 OR10R3P-201ENST00000361688 942 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 MIR375-201ENST00000362103 64 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 ATP5HP3-201ENST00000396994 486 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC016739.1-201ENST00000405359 345 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 HMGB3P20-201ENST00000417997 600 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC093155.2-201ENST00000420734 937 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 NMD3P2-201ENST00000421815 761 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 OR5W1P-201ENST00000423705 938 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 CALM1P1-201ENST00000442082 433 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 ARPC3P5-201ENST00000448802 534 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 YWHAEP1-201ENST00000453697 763 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC023598.1-201ENST00000472521 361 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC074386.1-201ENST00000476560 767 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 RN7SL177P-201ENST00000476596 299 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 RN7SL57P-201ENST00000493687 290 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC010486.1-201ENST00000511793 424 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC026412.2-201ENST00000512270 1075 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 SNORA70.20-201ENST00000516848 126 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 TRMT10BP1-201ENST00000519377 943 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AL355375.2-201ENST00000574825 175 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC011453.2-201ENST00000603737 729 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC108479.2-201ENST00000617314 601 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AL158801.5-201ENST00000623123 465 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC011815.3-201ENST00000624194 473 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 MIR193BHG-214ENST00000641765 509 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AC123769.1-201ENST00000530992 3192 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 SEC63P2-201ENST00000503863 1939 ntBASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHKBP1Q8TBC3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AC092692.1-201ENST00000623625 2595 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AC007114.2-201ENST00000576014 4281 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 DOCK11P1-201ENST00000553480 5932 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AC010132.2-201ENST00000295493 1043 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 RNU6-463P-201ENST00000384340 107 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 RPS3AP36-201ENST00000398190 775 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 Y_RNA.598-201ENST00000410480 95 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 RN7SKP293-201ENST00000411389 296 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 SDHDP6-201ENST00000414693 480 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 RPS17P17-201ENST00000419392 409 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AC092651.1-201ENST00000426110 312 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 VDAC1P6-201ENST00000430062 855 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AL358934.1-201ENST00000432346 324 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AC023512.1-201ENST00000444513 499 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 OR13K1P-201ENST00000444577 975 ntBASIC6.24□□□□□ -1.41
SHKBP1Q8TBC3 AL022237.1-201ENST00000446663 358 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms