Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC006960.3-201ENST00000561845 705 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.22□□□□□ -1.89
SSBP1Q04837 AC106785.3-201ENST00000564064 847 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AL137072.1-201ENST00000603444 466 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AL163642.2-201ENST00000604722 1019 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AC008121.2-201ENST00000614647 523 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 MIR6826-201ENST00000617808 98 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 AL158062.1-201ENST00000619632 745 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.22□□□□□ -1.89
SSBP1Q04837 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.22□□□□□ -1.89
SSBP1Q04837 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.22□□□□□ -1.89
SSBP1Q04837 BMS1P21-201ENST00000634565 365 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP1Q04837 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.22□□□□□ -1.89
SSBP1Q04837 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP1Q04837 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP1Q04837 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP1Q04837 AC008725.1-201ENST00000605123 2263 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
SSBP1Q04837 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSBP1Q04837 AC131971.1-201ENST00000332881 1482 ntBASIC3.22□□□□□ -1.89
SSBP1Q04837 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.89
SSBP1Q04837 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 AC134882.1-201ENST00000603738 1676 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SSBP1Q04837 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 AC011503.2-201ENST00000594230 1500 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.21□□□□□ -1.9
SSBP1Q04837 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 AL161909.1-201ENST00000397390 712 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 AL136116.1-201ENST00000403591 381 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 AC016397.1-201ENST00000412463 242 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 TPT1P2-201ENST00000413105 503 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.21□□□□□ -1.9
SSBP1Q04837 AL590806.1-201ENST00000415818 853 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 RPL17P36-201ENST00000420302 549 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.21□□□□□ -1.9
SSBP1Q04837 USP9YP9-201ENST00000429406 715 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.21□□□□□ -1.9
SSBP1Q04837 ACTR3P2-201ENST00000439585 1257 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.21□□□□□ -1.9
SSBP1Q04837 MTND2P28-201ENST00000457540 1044 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 HMGB3P14-201ENST00000494195 599 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 AC106806.2-201ENST00000509365 500 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.21□□□□□ -1.9
SSBP1Q04837 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.21□□□□□ -1.9
SSBP1Q04837 RNU6-964P-201ENST00000516524 69 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.21□□□□□ -1.9
SSBP1Q04837 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
SSBP1Q04837 AC006116.5-201ENST00000591936 559 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 AL354760.1-201ENST00000608357 643 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.21□□□□□ -1.9
SSBP1Q04837 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
SSBP1Q04837 AC010608.2-201ENST00000624830 470 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 AL732372.2-225ENST00000642124 456 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 MFSD8-216ENST00000641147 4009 ntBASIC3.21□□□□□ -1.9
SSBP1Q04837 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSBP1Q04837 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP1Q04837 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP1Q04837 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP1Q04837 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP1Q04837 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SSBP1Q04837 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP1Q04837 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP1Q04837 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP1Q04837 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP1Q04837 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP1Q04837 AC104297.1-201ENST00000393779 870 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 RAB5CP1-201ENST00000395972 580 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
SSBP1Q04837 AC011933.1-201ENST00000413334 321 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 RPS26P13-201ENST00000419030 330 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 TCEA1P2-201ENST00000420496 906 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP1Q04837 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.2□□□□□ -1.9
SSBP1Q04837 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP1Q04837 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SSBP1Q04837 AC245517.2-201ENST00000442890 346 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 RPS11P1-201ENST00000451072 473 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 snoU13.1-201ENST00000459157 104 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AC116533.1-201ENST00000459748 321 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 RPS23P7-201ENST00000466210 444 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AC092045.1-201ENST00000495716 1231 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.2□□□□□ -1.9
SSBP1Q04837 IGHV3-32-201ENST00000519182 355 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.2□□□□□ -1.9
SSBP1Q04837 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP1Q04837 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP1Q04837 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP1Q04837 AL121766.1-201ENST00000547436 487 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AC090888.3-201ENST00000558917 509 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 NPM1P47-201ENST00000560843 856 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms