Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.1□□□□□ -1.75
PKNOX1P55347 RNU6-532P-201ENST00000384318 107 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AC019050.1-201ENST00000418508 492 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 RWDD4P2-201ENST00000426392 563 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 RPL23AP1-201ENST00000428990 471 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
PKNOX1P55347 GSTA7P-201ENST00000438425 448 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AC245517.2-201ENST00000442890 346 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.1□□□□□ -1.75
PKNOX1P55347 MTND3P4-201ENST00000453537 303 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AL133477.1-201ENST00000457472 514 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 RN7SL98P-201ENST00000462271 300 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.1□□□□□ -1.75
PKNOX1P55347 SYT14P1-201ENST00000481459 721 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 RWDD4P1-201ENST00000488019 565 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 RN7SL810P-201ENST00000493031 276 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC010627.1-201ENST00000503819 1294 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AC018797.3-201ENST00000513388 1241 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 RNU6-760P-201ENST00000516078 97 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC020658.4-201ENST00000613987 684 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC095038.2-201ENST00000621464 1070 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 AP001784.1-201ENST00000624107 428 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.1□□□□□ -1.75
PKNOX1P55347 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PKNOX1P55347 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PKNOX1P55347 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PKNOX1P55347 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PKNOX1P55347 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.1□□□□□ -1.75
PKNOX1P55347 AC134882.1-201ENST00000603738 1676 ntBASIC4.1□□□□□ -1.75
PKNOX1P55347 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.09□□□□□ -1.75
PKNOX1P55347 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PKNOX1P55347 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PKNOX1P55347 RNVU1-6-201ENST00000364688 164 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PKNOX1P55347 ZNF603P-201ENST00000405613 487 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 RPS16P5-201ENST00000406501 404 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.09□□□□□ -1.75
PKNOX1P55347 AL450992.3-201ENST00000413192 568 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PKNOX1P55347 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PKNOX1P55347 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.09□□□□□ -1.75
PKNOX1P55347 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.09□□□□□ -1.75
PKNOX1P55347 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PKNOX1P55347 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.09□□□□□ -1.75
PKNOX1P55347 RPL7P32-201ENST00000457119 744 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 RNU6-1218P-201ENST00000458990 108 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 RPL23AP71-201ENST00000470966 469 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 RPS29P19-201ENST00000479709 171 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.09□□□□□ -1.75
PKNOX1P55347 HMGB1P47-201ENST00000511281 589 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.09□□□□□ -1.75
PKNOX1P55347 RNU6-1308P-201ENST00000516817 103 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 IGLVIV-65-201ENST00000517313 360 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.09□□□□□ -1.75
PKNOX1P55347 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.09□□□□□ -1.75
PKNOX1P55347 HIGD1AP18-201ENST00000520730 278 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PKNOX1P55347 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.09□□□□□ -1.75
PKNOX1P55347 AC090515.3-201ENST00000560431 315 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.09□□□□□ -1.75
PKNOX1P55347 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PKNOX1P55347 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PKNOX1P55347 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.09□□□□□ -1.75
PKNOX1P55347 RPL12P25-202ENST00000598100 674 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 AC090948.1-201ENST00000607464 549 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.09□□□□□ -1.75
PKNOX1P55347 AP005264.7-201ENST00000625003 745 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 AC119674.1-212ENST00000641155 993 ntBASIC4.09□□□□□ -1.75
PKNOX1P55347 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.09□□□□□ -1.75
PKNOX1P55347 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.09□□□□□ -1.75
PKNOX1P55347 AC025031.4-201ENST00000621248 3271 ntBASIC4.09□□□□□ -1.76
PKNOX1P55347 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.08□□□□□ -1.76
PKNOX1P55347 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
PKNOX1P55347 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 RN7SKP103-201ENST00000363848 320 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 MIR320B1-201ENST00000390209 79 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 RNA5SP332-201ENST00000391063 115 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 AL583835.1-201ENST00000399570 407 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 SNORA3C-201ENST00000408792 125 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 P2RY10P2-201ENST00000416730 913 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 TRGV6-201ENST00000417928 299 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.08□□□□□ -1.76
PKNOX1P55347 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.08□□□□□ -1.76
PKNOX1P55347 TRIM60P13-201ENST00000432350 1283 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms