Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6-603P-201ENST00000411403 107 ntBASIC4.76□□□□□ -1.65
VCPP55072 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.76□□□□□ -1.65
VCPP55072 AC091390.3-201ENST00000426478 338 ntBASIC4.76□□□□□ -1.65
VCPP55072 MTCO1P54-201ENST00000430139 712 ntBASIC4.76□□□□□ -1.65
VCPP55072 AL353748.1-201ENST00000440753 474 ntBASIC4.76□□□□□ -1.65
VCPP55072 AL935212.3-201ENST00000450729 284 ntBASIC4.76□□□□□ -1.65
VCPP55072 PRSS3P4-201ENST00000453323 162 ntBASIC4.76□□□□□ -1.65
VCPP55072 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.76□□□□□ -1.65
VCPP55072 snoU13.24-201ENST00000458998 104 ntBASIC4.76□□□□□ -1.65
VCPP55072 AC021205.1-201ENST00000468797 348 ntBASIC4.76□□□□□ -1.65
VCPP55072 METTL15P1-201ENST00000481421 1045 ntBASIC4.76□□□□□ -1.65
VCPP55072 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 AC108471.1-201ENST00000513977 287 ntBASIC4.76□□□□□ -1.65
VCPP55072 RNU6-362P-201ENST00000516736 90 ntBASIC4.76□□□□□ -1.65
VCPP55072 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.76□□□□□ -1.65
VCPP55072 AC090515.3-201ENST00000560431 315 ntBASIC4.76□□□□□ -1.65
VCPP55072 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.76□□□□□ -1.65
VCPP55072 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.76□□□□□ -1.65
VCPP55072 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.76□□□□□ -1.65
VCPP55072 AC027281.1-201ENST00000574178 758 ntBASIC4.76□□□□□ -1.65
VCPP55072 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.76□□□□□ -1.65
VCPP55072 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.76□□□□□ -1.65
VCPP55072 AC023762.1-201ENST00000603280 584 ntBASIC4.76□□□□□ -1.65
VCPP55072 AC008966.2-201ENST00000606157 453 ntBASIC4.76□□□□□ -1.65
VCPP55072 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.76□□□□□ -1.65
VCPP55072 AC026979.4-201ENST00000606555 645 ntBASIC4.76□□□□□ -1.65
VCPP55072 AC107308.1-201ENST00000615897 301 ntBASIC4.76□□□□□ -1.65
VCPP55072 AC092159.4-201ENST00000624944 550 ntBASIC4.76□□□□□ -1.65
VCPP55072 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.76□□□□□ -1.65
VCPP55072 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
VCPP55072 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VCPP55072 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.75□□□□□ -1.65
VCPP55072 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
VCPP55072 PHKBP1-201ENST00000450951 1951 ntBASIC4.75□□□□□ -1.65
VCPP55072 AL592182.3-201ENST00000642132 3304 ntBASIC4.75□□□□□ -1.65
VCPP55072 AC087190.4-201ENST00000574616 8334 ntBASIC4.75□□□□□ -1.65
VCPP55072 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VCPP55072 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VCPP55072 RNU6-984P-201ENST00000363236 109 ntBASIC4.75□□□□□ -1.65
VCPP55072 RPS24P12-201ENST00000402084 394 ntBASIC4.75□□□□□ -1.65
VCPP55072 Z98745.1-201ENST00000402553 494 ntBASIC4.75□□□□□ -1.65
VCPP55072 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 TMSB10P2-201ENST00000416049 131 ntBASIC4.75□□□□□ -1.65
VCPP55072 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 YWHAZP2-201ENST00000440317 728 ntBASIC4.75□□□□□ -1.65
VCPP55072 ISCUP1-201ENST00000454451 448 ntBASIC4.75□□□□□ -1.65
VCPP55072 SCARNA10-201ENST00000459255 330 ntBASIC4.75□□□□□ -1.65
VCPP55072 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.75□□□□□ -1.65
VCPP55072 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.75□□□□□ -1.65
VCPP55072 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.75□□□□□ -1.65
VCPP55072 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.75□□□□□ -1.65
VCPP55072 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.75□□□□□ -1.65
VCPP55072 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.75□□□□□ -1.65
VCPP55072 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.75□□□□□ -1.65
VCPP55072 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.75□□□□□ -1.65
VCPP55072 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.75□□□□□ -1.65
VCPP55072 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.75□□□□□ -1.65
VCPP55072 AC010200.2-201ENST00000605098 235 ntBASIC4.75□□□□□ -1.65
VCPP55072 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.75□□□□□ -1.65
VCPP55072 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VCPP55072 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VCPP55072 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VCPP55072 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VCPP55072 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VCPP55072 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.75□□□□□ -1.65
VCPP55072 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VCPP55072 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.74□□□□□ -1.65
VCPP55072 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.74□□□□□ -1.65
VCPP55072 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.74□□□□□ -1.65
VCPP55072 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VCPP55072 RNU6-618P-201ENST00000363518 112 ntBASIC4.74□□□□□ -1.65
VCPP55072 RNA5SP366-201ENST00000365454 123 ntBASIC4.74□□□□□ -1.65
VCPP55072 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 RN7SKP167-201ENST00000411047 285 ntBASIC4.74□□□□□ -1.65
VCPP55072 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.74□□□□□ -1.65
VCPP55072 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.74□□□□□ -1.65
VCPP55072 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.74□□□□□ -1.65
VCPP55072 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.74□□□□□ -1.65
VCPP55072 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.74□□□□□ -1.65
VCPP55072 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.74□□□□□ -1.65
VCPP55072 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.74□□□□□ -1.65
VCPP55072 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
VCPP55072 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.74□□□□□ -1.65
VCPP55072 RNU6-347P-201ENST00000516658 105 ntBASIC4.74□□□□□ -1.65
VCPP55072 VTA1P2-201ENST00000520205 911 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms