Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.52□□□□□ -1.53
CLTCL1P53675 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.52□□□□□ -1.53
CLTCL1P53675 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.52□□□□□ -1.53
CLTCL1P53675 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.52□□□□□ -1.53
CLTCL1P53675 AC005972.3-201ENST00000606304 481 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 AC138627.1-204ENST00000641894 765 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CLTCL1P53675 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLTCL1P53675 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.52□□□□□ -1.53
CLTCL1P53675 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLTCL1P53675 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CLTCL1P53675 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.51□□□□□ -1.53
CLTCL1P53675 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
CLTCL1P53675 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.51□□□□□ -1.53
CLTCL1P53675 AC114814.2-201ENST00000419195 485 ntBASIC5.51□□□□□ -1.53
CLTCL1P53675 AC011742.1-201ENST00000431448 434 ntBASIC5.51□□□□□ -1.53
CLTCL1P53675 AC084198.1-201ENST00000477747 402 ntBASIC5.51□□□□□ -1.53
CLTCL1P53675 TCP11X3P-202ENST00000514289 1254 ntBASIC5.51□□□□□ -1.53
CLTCL1P53675 AC008802.1-201ENST00000519121 791 ntBASIC5.51□□□□□ -1.53
CLTCL1P53675 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.51□□□□□ -1.53
CLTCL1P53675 AC016957.2-201ENST00000616998 848 ntBASIC5.51□□□□□ -1.53
CLTCL1P53675 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.51□□□□□ -1.53
CLTCL1P53675 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CLTCL1P53675 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CLTCL1P53675 AC074029.4-201ENST00000624796 1859 ntBASIC5.51□□□□□ -1.53
CLTCL1P53675 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLTCL1P53675 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLTCL1P53675 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLTCL1P53675 RPL7AP73-201ENST00000413490 353 ntBASIC5.5□□□□□ -1.53
CLTCL1P53675 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 REREP1Y-201ENST00000422655 198 ntBASIC5.5□□□□□ -1.53
CLTCL1P53675 REREP2Y-201ENST00000439103 200 ntBASIC5.5□□□□□ -1.53
CLTCL1P53675 RPS3AP12-201ENST00000443616 753 ntBASIC5.5□□□□□ -1.53
CLTCL1P53675 PPIAP3-201ENST00000450588 505 ntBASIC5.5□□□□□ -1.53
CLTCL1P53675 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLTCL1P53675 IGKV2-38-201ENST00000517443 247 ntBASIC5.5□□□□□ -1.53
CLTCL1P53675 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.5□□□□□ -1.53
CLTCL1P53675 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLTCL1P53675 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.5□□□□□ -1.53
CLTCL1P53675 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.49□□□□□ -1.53
CLTCL1P53675 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
CLTCL1P53675 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLTCL1P53675 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLTCL1P53675 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CLTCL1P53675 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.49□□□□□ -1.53
CLTCL1P53675 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLTCL1P53675 MIR483-201ENST00000385070 76 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 NPM1P38-201ENST00000403835 865 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.49□□□□□ -1.53
CLTCL1P53675 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.49□□□□□ -1.53
CLTCL1P53675 AC106707.2-201ENST00000484182 374 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
CLTCL1P53675 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.49□□□□□ -1.53
CLTCL1P53675 RN7SKP18-201ENST00000516005 275 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 AP000889.1-201ENST00000530968 660 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.49□□□□□ -1.53
CLTCL1P53675 MTND6P33-201ENST00000571794 183 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.49□□□□□ -1.53
CLTCL1P53675 MIR4298-201ENST00000584380 73 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.49□□□□□ -1.53
CLTCL1P53675 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.49□□□□□ -1.53
CLTCL1P53675 AC026368.1-201ENST00000614934 690 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.49□□□□□ -1.53
CLTCL1P53675 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.49□□□□□ -1.53
CLTCL1P53675 AL596275.2-204ENST00000641628 552 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 AL596275.2-206ENST00000641957 626 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 LINC00561-201ENST00000565815 2738 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 AC083843.3-201ENST00000623679 2186 ntBASIC5.49□□□□□ -1.53
CLTCL1P53675 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLTCL1P53675 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLTCL1P53675 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLTCL1P53675 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLTCL1P53675 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.49□□□□□ -1.53
CLTCL1P53675 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.49□□□□□ -1.53
CLTCL1P53675 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
CLTCL1P53675 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLTCL1P53675 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLTCL1P53675 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.49□□□□□ -1.53
CLTCL1P53675 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLTCL1P53675 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CLTCL1P53675 MIR490-201ENST00000384865 128 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 SNORA3.3-201ENST00000408712 125 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.48□□□□□ -1.53
CLTCL1P53675 SETP14-201ENST00000497538 873 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 PPBPP1-201ENST00000510807 373 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 RN7SKP13-201ENST00000515933 244 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.48□□□□□ -1.53
CLTCL1P53675 GNRHR2P1-201ENST00000555315 631 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 AC005412.1-201ENST00000580812 1049 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLTCL1P53675 MAPK10-253ENST00000641010 4072 ntBASIC5.48□□□□□ -1.53
CLTCL1P53675 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms