Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SAP18P1-201ENST00000512058 390 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.75□□□□□ -1.65
LIMK1P53667 RNU2-30P-201ENST00000516209 141 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 RNU6-334P-201ENST00000517072 102 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.75□□□□□ -1.65
LIMK1P53667 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.75□□□□□ -1.65
LIMK1P53667 AC025260.1-201ENST00000548858 430 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AL161713.1-201ENST00000555538 145 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.75□□□□□ -1.65
LIMK1P53667 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.75□□□□□ -1.65
LIMK1P53667 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 MIR3138-201ENST00000585238 82 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 BNIP3P35-201ENST00000604530 490 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AC079610.2-201ENST00000604818 690 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AC018695.5-201ENST00000605872 315 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.75□□□□□ -1.65
LIMK1P53667 AC108359.1-201ENST00000616451 1211 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AC095038.2-201ENST00000621464 1070 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AC015726.3-201ENST00000624501 418 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 PNPT1P2-201ENST00000456768 2050 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 AL592494.2-201ENST00000425455 1548 ntBASIC4.75□□□□□ -1.65
LIMK1P53667 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.75□□□□□ -1.65
LIMK1P53667 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LIMK1P53667 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.74□□□□□ -1.65
LIMK1P53667 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.74□□□□□ -1.65
LIMK1P53667 Z95331.1-201ENST00000623075 23112 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LIMK1P53667 AC007529.1-201ENST00000418574 2178 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.74□□□□□ -1.65
LIMK1P53667 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.74□□□□□ -1.65
LIMK1P53667 GTF2H2B-203ENST00000508065 1432 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LIMK1P53667 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 LINC01355-201ENST00000566551 5444 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 RNU6-317P-201ENST00000384031 107 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 RNU6-796P-201ENST00000391086 107 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 RNA5SP44-201ENST00000410446 133 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 MTND4P11-201ENST00000417020 1058 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 RAD23BP1-201ENST00000421404 1227 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 PNRC2P1-201ENST00000423940 420 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 MTCO2P1-201ENST00000424648 477 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 CBX1P1-201ENST00000440184 427 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.74□□□□□ -1.65
LIMK1P53667 AL031584.1-201ENST00000447169 754 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 AC114755.5-201ENST00000447760 831 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 RN7SL441P-201ENST00000492388 296 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 AC104971.1-201ENST00000495117 578 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.74□□□□□ -1.65
LIMK1P53667 AC007016.1-201ENST00000512110 244 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 RNA5SP497-201ENST00000516081 97 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 RNA5SP303-201ENST00000516192 130 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.74□□□□□ -1.65
LIMK1P53667 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.74□□□□□ -1.65
LIMK1P53667 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.74□□□□□ -1.65
LIMK1P53667 RPL23AP53-201ENST00000521854 457 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.74□□□□□ -1.65
LIMK1P53667 AC115621.1-201ENST00000604653 858 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 AC005014.3-201ENST00000605985 190 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 AC019206.1-201ENST00000621938 425 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 CR392039.4-201ENST00000624968 501 ntBASIC4.74□□□□□ -1.65
LIMK1P53667 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.74□□□□□ -1.65
LIMK1P53667 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.74□□□□□ -1.65
LIMK1P53667 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIMK1P53667 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.73□□□□□ -1.65
LIMK1P53667 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LIMK1P53667 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 RNU1-94P-201ENST00000362627 173 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LIMK1P53667 RNA5SP171-201ENST00000391071 115 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 U3.32-201ENST00000408116 212 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 SNORA11F-201ENST00000408237 128 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 LINC01347-201ENST00000417964 355 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LIMK1P53667 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 AL645939.1-201ENST00000453429 797 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms