Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR124-3-201ENST00000384866 87 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.57□□□□□ -1.68
HNF4AP41235 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.57□□□□□ -1.68
HNF4AP41235 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.57□□□□□ -1.68
HNF4AP41235 RPL31P45-201ENST00000419532 356 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.57□□□□□ -1.68
HNF4AP41235 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.57□□□□□ -1.68
HNF4AP41235 AC023141.6-201ENST00000429418 337 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 RPS26P40-201ENST00000435209 294 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.57□□□□□ -1.68
HNF4AP41235 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.57□□□□□ -1.68
HNF4AP41235 HMGB1P48-201ENST00000446155 598 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.57□□□□□ -1.68
HNF4AP41235 RPL35AP28-201ENST00000459730 331 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.57□□□□□ -1.68
HNF4AP41235 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.57□□□□□ -1.68
HNF4AP41235 AC091868.1-201ENST00000508746 304 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 HMGB3P13-201ENST00000511263 607 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 AC021146.3-201ENST00000511911 260 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 OR7H2P-201ENST00000513483 306 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 HMGN1P15-201ENST00000513870 295 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.57□□□□□ -1.68
HNF4AP41235 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.57□□□□□ -1.68
HNF4AP41235 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.57□□□□□ -1.68
HNF4AP41235 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HNF4AP41235 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 AC074029.1-201ENST00000552531 1044 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 BGLT3-201ENST00000564523 994 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 MIR3667-201ENST00000581025 74 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.57□□□□□ -1.68
HNF4AP41235 AL139022.2-201ENST00000606934 443 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 uc_338.18-201ENST00000615451 175 ntBASIC4.57□□□□□ -1.68
HNF4AP41235 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.57□□□□□ -1.68
HNF4AP41235 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.57□□□□□ -1.68
HNF4AP41235 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.57□□□□□ -1.68
HNF4AP41235 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.57□□□□□ -1.68
HNF4AP41235 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HNF4AP41235 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 AL592494.2-201ENST00000425455 1548 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HNF4AP41235 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.56□□□□□ -1.68
HNF4AP41235 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 RNU1-94P-201ENST00000362627 173 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HNF4AP41235 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.56□□□□□ -1.68
HNF4AP41235 HMGB3P31-201ENST00000413333 595 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.56□□□□□ -1.68
HNF4AP41235 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.56□□□□□ -1.68
HNF4AP41235 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.56□□□□□ -1.68
HNF4AP41235 ARL4AP3-201ENST00000441452 574 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 AL158053.1-201ENST00000441503 453 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 TDGF1P1-201ENST00000445734 527 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 RPS20P21-201ENST00000466859 343 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.56□□□□□ -1.68
HNF4AP41235 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.56□□□□□ -1.68
HNF4AP41235 AC008565.1-201ENST00000509046 885 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.56□□□□□ -1.68
HNF4AP41235 C1DP5-201ENST00000525775 383 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.56□□□□□ -1.68
HNF4AP41235 MTND5P21-201ENST00000531961 522 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.56□□□□□ -1.68
HNF4AP41235 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.56□□□□□ -1.68
HNF4AP41235 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.56□□□□□ -1.68
HNF4AP41235 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
HNF4AP41235 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.56□□□□□ -1.68
HNF4AP41235 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.56□□□□□ -1.68
HNF4AP41235 DNAJC19P3-201ENST00000594491 331 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HNF4AP41235 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.56□□□□□ -1.68
HNF4AP41235 AC005084.1-201ENST00000605160 304 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 IMMP1LP1-201ENST00000605170 488 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HNF4AP41235 AC024595.1-201ENST00000623088 387 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 AC067931.1-201ENST00000624190 671 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 AL672167.1-203ENST00000641299 2975 ntBASIC4.56□□□□□ -1.68
HNF4AP41235 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HNF4AP41235 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HNF4AP41235 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms