Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP1P30622 AL161756.2-201ENST00000604597 246 ntBASIC6.18□□□□□ -1.42
CLIP1P30622 AC012603.1-201ENST00000606424 528 ntBASIC6.18□□□□□ -1.42
CLIP1P30622 AC079684.1-201ENST00000621405 437 ntBASIC6.18□□□□□ -1.42
CLIP1P30622 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP1P30622 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP1P30622 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP1P30622 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CLIP1P30622 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.18□□□□□ -1.42
CLIP1P30622 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
CLIP1P30622 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP1P30622 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.18□□□□□ -1.42
CLIP1P30622 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLIP1P30622 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC6.18□□□□□ -1.42
CLIP1P30622 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.17□□□□□ -1.42
CLIP1P30622 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP1P30622 HSPE1P16-201ENST00000426640 348 ntBASIC6.17□□□□□ -1.42
CLIP1P30622 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.17□□□□□ -1.42
CLIP1P30622 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.17□□□□□ -1.42
CLIP1P30622 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.17□□□□□ -1.42
CLIP1P30622 AL391261.4-201ENST00000616012 481 ntBASIC6.17□□□□□ -1.42
CLIP1P30622 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC6.17□□□□□ -1.42
CLIP1P30622 AP004289.2-201ENST00000444413 1457 ntBASIC6.17□□□□□ -1.42
CLIP1P30622 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP1P30622 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP1P30622 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP1P30622 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP1P30622 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CLIP1P30622 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP1P30622 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLIP1P30622 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
CLIP1P30622 Y_RNA.333-201ENST00000365274 102 ntBASIC6.16□□□□□ -1.42
CLIP1P30622 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.16□□□□□ -1.42
CLIP1P30622 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.16□□□□□ -1.42
CLIP1P30622 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.16□□□□□ -1.42
CLIP1P30622 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.16□□□□□ -1.42
CLIP1P30622 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.16□□□□□ -1.42
CLIP1P30622 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.16□□□□□ -1.42
CLIP1P30622 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.16□□□□□ -1.42
CLIP1P30622 AL049634.3-201ENST00000604968 457 ntBASIC6.16□□□□□ -1.42
CLIP1P30622 AP000255.1-201ENST00000610276 676 ntBASIC6.16□□□□□ -1.42
CLIP1P30622 AC015967.1-201ENST00000619893 476 ntBASIC6.16□□□□□ -1.42
CLIP1P30622 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.16□□□□□ -1.42
CLIP1P30622 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP1P30622 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP1P30622 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CLIP1P30622 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP1P30622 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.16□□□□□ -1.42
CLIP1P30622 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CLIP1P30622 RPL21P17-201ENST00000397467 475 ntBASIC6.16□□□□□ -1.42
CLIP1P30622 TRIM60P17-201ENST00000415181 719 ntBASIC6.16□□□□□ -1.42
CLIP1P30622 AL133162.1-201ENST00000463228 453 ntBASIC6.16□□□□□ -1.42
CLIP1P30622 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.16□□□□□ -1.42
CLIP1P30622 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.16□□□□□ -1.42
CLIP1P30622 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.16□□□□□ -1.42
CLIP1P30622 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.16□□□□□ -1.42
CLIP1P30622 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLIP1P30622 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.16□□□□□ -1.42
CLIP1P30622 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.16□□□□□ -1.42
CLIP1P30622 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP1P30622 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP1P30622 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP1P30622 AC097504.1-201ENST00000515103 2415 ntBASIC6.15□□□□□ -1.42
CLIP1P30622 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP1P30622 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CLIP1P30622 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP1P30622 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLIP1P30622 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CLIP1P30622 AC024560.2-201ENST00000507981 1497 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLIP1P30622 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.15□□□□□ -1.43
CLIP1P30622 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CLIP1P30622 AC092647.1-201ENST00000420654 287 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 AC104306.1-201ENST00000449702 371 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 RPL21P11-201ENST00000461458 483 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 RAC1P2-201ENST00000511164 579 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 AC026726.1-201ENST00000512859 601 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 RNA5SP208-201ENST00000516156 78 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 RNU1-95P-201ENST00000516357 160 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 RNU1-128P-201ENST00000516704 160 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC6.15□□□□□ -1.43
CLIP1P30622 AC016839.1-201ENST00000578162 867 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.15□□□□□ -1.43
CLIP1P30622 AC019176.2-201ENST00000611579 315 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 AC063952.1-203ENST00000634410 658 ntBASIC6.15□□□□□ -1.43
CLIP1P30622 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC6.15□□□□□ -1.43
CLIP1P30622 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLIP1P30622 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP1P30622 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP1P30622 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP1P30622 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.14□□□□□ -1.43
CLIP1P30622 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP1P30622 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLIP1P30622 TCEA1P2-201ENST00000420496 906 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 AL591419.1-201ENST00000427423 339 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 TPTE2P3-201ENST00000441562 1189 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.14□□□□□ -1.43
CLIP1P30622 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.14□□□□□ -1.43
CLIP1P30622 RPL7P49-201ENST00000471402 708 ntBASIC6.14□□□□□ -1.43
CLIP1P30622 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms