Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFSF4P23510 XKRY-201ENST00000510392 1100 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 AC010486.3-201ENST00000511602 785 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.84□□□□□ -1.63
TNFSF4P23510 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.84□□□□□ -1.63
TNFSF4P23510 MTATP6P1-201ENST00000514057 681 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFSF4P23510 AC136777.2-201ENST00000522979 358 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFSF4P23510 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFSF4P23510 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.84□□□□□ -1.63
TNFSF4P23510 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFSF4P23510 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFSF4P23510 AC060780.2-201ENST00000589047 198 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 VN1R92P-201ENST00000598511 928 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 AC025857.2-201ENST00000602711 238 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 AL109653.1-201ENST00000603091 248 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 AP003117.2-201ENST00000606010 545 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 AL008729.2-201ENST00000606393 473 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF4P23510 AC231657.1-201ENST00000624313 397 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 AL691477.1-201ENST00000624398 162 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 SNORA17.5-201ENST00000630429 132 ntBASIC4.84□□□□□ -1.63
TNFSF4P23510 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF4P23510 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF4P23510 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFSF4P23510 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TNFSF4P23510 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TNFSF4P23510 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFSF4P23510 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TNFSF4P23510 AC018809.2-201ENST00000602436 3823 ntBASIC4.84□□□□□ -1.64
TNFSF4P23510 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TNFSF4P23510 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TNFSF4P23510 MTND5P24-201ENST00000438892 1767 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF4P23510 MTCO1P14-201ENST00000441695 1559 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 CASC19-221ENST00000641309 1382 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF4P23510 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TNFSF4P23510 KYNUP3-201ENST00000574386 1341 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TNFSF4P23510 RNA5SP453-201ENST00000362503 119 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 SNORA64.1-201ENST00000362600 132 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 RNU4-4P-201ENST00000364588 130 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 SNORA5.1-201ENST00000384275 131 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 RNA5SP91-201ENST00000390902 119 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.83□□□□□ -1.64
TNFSF4P23510 RN7SKP247-201ENST00000411094 308 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 P2RY10P2-201ENST00000416730 913 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.83□□□□□ -1.64
TNFSF4P23510 RNF10P1-201ENST00000418589 369 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.83□□□□□ -1.64
TNFSF4P23510 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFSF4P23510 PSMA2P3-201ENST00000429685 675 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.83□□□□□ -1.64
TNFSF4P23510 AL389925.1-201ENST00000432257 728 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.83□□□□□ -1.64
TNFSF4P23510 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF4P23510 AC064862.4-201ENST00000442180 334 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFSF4P23510 IGHV5-78-201ENST00000450948 295 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF4P23510 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF4P23510 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 RPS15AP17-201ENST00000470598 390 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 BET1P1-201ENST00000482276 359 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 ATP5LP5-201ENST00000483050 299 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 RPL7P51-201ENST00000490532 749 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 RN7SL591P-201ENST00000496150 292 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AC104109.1-201ENST00000498563 436 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFSF4P23510 RNU6-678P-201ENST00000516832 109 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 SNORA43.3-201ENST00000517240 103 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFSF4P23510 IGLV3-30-201ENST00000524362 298 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF4P23510 DEFB131D-201ENST00000526803 184 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFSF4P23510 CENPUP2-201ENST00000555897 1186 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFSF4P23510 HSPE1P3-201ENST00000559254 309 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AC090888.1-201ENST00000561335 1141 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.83□□□□□ -1.64
TNFSF4P23510 MIR4311-201ENST00000580794 100 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 H3F3BP2-201ENST00000583907 357 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 VN1R90P-201ENST00000595717 726 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.83□□□□□ -1.64
TNFSF4P23510 AC063977.5-201ENST00000601044 974 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 AL513477.2-201ENST00000607858 568 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFSF4P23510 AC105429.2-201ENST00000610567 517 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms