Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC007066.1-201ENST00000392902 381 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 GNG5P5-201ENST00000420444 220 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA1P17096 AL451062.2-201ENST00000427515 271 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 NPM1P25-201ENST00000429734 854 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGA1P17096 RPS17P13-201ENST00000448974 407 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA1P17096 SEPT14P1-201ENST00000458703 648 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 RPL7L1P8-201ENST00000469911 741 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 AC025445.1-201ENST00000502728 300 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 HMGB1P19-201ENST00000517578 577 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA1P17096 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGA1P17096 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.02□□□□□ -1.77
HMGA1P17096 GTF2IP22-201ENST00000554443 182 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 GNRHR2P1-201ENST00000555315 631 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGA1P17096 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA1P17096 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.02□□□□□ -1.77
HMGA1P17096 AC005972.3-201ENST00000606304 481 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 RNU1-30P-201ENST00000606575 163 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA1P17096 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA1P17096 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGA1P17096 AC011266.1-201ENST00000624119 3569 ntBASIC4.02□□□□□ -1.77
HMGA1P17096 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA1P17096 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HMGA1P17096 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGA1P17096 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA1P17096 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA1P17096 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
HMGA1P17096 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA1P17096 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGA1P17096 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
HMGA1P17096 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA1P17096 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA1P17096 AC120036.2-201ENST00000509729 1474 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 AC106871.1-201ENST00000568324 3102 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 SNORD3H-201ENST00000384486 214 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HMGA1P17096 RPL21P17-201ENST00000397467 475 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGA1P17096 LINC01881-201ENST00000416103 412 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AC092647.1-201ENST00000420654 287 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGA1P17096 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGA1P17096 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 RPL6P5-201ENST00000445678 828 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGA1P17096 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGA1P17096 RPL7P15-201ENST00000461190 712 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AC022034.3-201ENST00000471393 478 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.01□□□□□ -1.77
HMGA1P17096 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA1P17096 AC026403.1-201ENST00000518938 295 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AC022695.1-201ENST00000522089 237 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA1P17096 CCNG2P1-201ENST00000549521 1000 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 MIR5187-201ENST00000583479 76 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AC068020.1-201ENST00000594215 661 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 AP000255.1-201ENST00000610276 676 ntBASIC4.01□□□□□ -1.77
HMGA1P17096 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGA1P17096 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HMGA1P17096 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA1P17096 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HMGA1P17096 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGA1P17096 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA1P17096 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGA1P17096 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGA1P17096 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 MAPK10-349ENST00000641767 3661 ntBASIC4□□□□□ -1.77
HMGA1P17096 AC024560.2-201ENST00000507981 1497 ntBASIC4□□□□□ -1.77
HMGA1P17096 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HMGA1P17096 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4□□□□□ -1.77
HMGA1P17096 RPS3AP25-201ENST00000411660 793 ntBASIC4□□□□□ -1.77
HMGA1P17096 TCEA1P2-201ENST00000420496 906 ntBASIC4□□□□□ -1.77
HMGA1P17096 AC069157.1-201ENST00000421749 137 ntBASIC4□□□□□ -1.77
HMGA1P17096 AC091286.1-201ENST00000431233 461 ntBASIC4□□□□□ -1.77
HMGA1P17096 KCTD9P3-201ENST00000434597 1169 ntBASIC4□□□□□ -1.77
HMGA1P17096 AC069285.2-201ENST00000440210 275 ntBASIC4□□□□□ -1.77
HMGA1P17096 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4□□□□□ -1.77
HMGA1P17096 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4□□□□□ -1.77
HMGA1P17096 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4□□□□□ -1.77
HMGA1P17096 CCDC58P3-201ENST00000590792 430 ntBASIC4□□□□□ -1.77
HMGA1P17096 AC244505.7-201ENST00000599675 272 ntBASIC4□□□□□ -1.77
HMGA1P17096 AL391497.1-201ENST00000608671 547 ntBASIC4□□□□□ -1.77
HMGA1P17096 AC244517.3-201ENST00000616254 1235 ntBASIC4□□□□□ -1.77
HMGA1P17096 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4□□□□□ -1.77
HMGA1P17096 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms