Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.39□□□□□ -1.07
CD44P16070 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CD44P16070 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
CD44P16070 RNU6-923P-201ENST00000364753 107 ntBASIC8.39□□□□□ -1.07
CD44P16070 SNORA40-201ENST00000388090 126 ntBASIC8.39□□□□□ -1.07
CD44P16070 SNORA69.1-201ENST00000390904 137 ntBASIC8.39□□□□□ -1.07
CD44P16070 UBBP1-201ENST00000392399 473 ntBASIC8.39□□□□□ -1.07
CD44P16070 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC8.39□□□□□ -1.07
CD44P16070 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC8.39□□□□□ -1.07
CD44P16070 AC099344.1-201ENST00000433548 492 ntBASIC8.39□□□□□ -1.07
CD44P16070 BSNDP4-201ENST00000436076 388 ntBASIC8.39□□□□□ -1.07
CD44P16070 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC8.39□□□□□ -1.07
CD44P16070 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC8.39□□□□□ -1.07
CD44P16070 AL137159.1-201ENST00000452808 512 ntBASIC8.39□□□□□ -1.07
CD44P16070 RPL30P10-201ENST00000488148 337 ntBASIC8.39□□□□□ -1.07
CD44P16070 AC087280.1-201ENST00000530632 1003 ntBASIC8.39□□□□□ -1.07
CD44P16070 AMZ2P1-203ENST00000565833 850 ntBASIC8.39□□□□□ -1.07
CD44P16070 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CD44P16070 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.39□□□□□ -1.07
CD44P16070 MIR6751-201ENST00000610479 63 ntBASIC8.39□□□□□ -1.07
CD44P16070 AC129908.1-201ENST00000624553 648 ntBASIC8.39□□□□□ -1.07
CD44P16070 IGHVIII-44-202ENST00000636235 289 ntBASIC8.39□□□□□ -1.07
CD44P16070 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.39□□□□□ -1.07
CD44P16070 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.39□□□□□ -1.07
CD44P16070 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.39□□□□□ -1.07
CD44P16070 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.39□□□□□ -1.07
CD44P16070 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CD44P16070 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.39□□□□□ -1.07
CD44P16070 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CD44P16070 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC8.38□□□□□ -1.07
CD44P16070 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 RNU6-984P-201ENST00000363236 109 ntBASIC8.38□□□□□ -1.07
CD44P16070 RIT1-201ENST00000368322 855 ntTSL 3 BASIC8.38□□□□□ -1.07
CD44P16070 RNU6-532P-201ENST00000384318 107 ntBASIC8.38□□□□□ -1.07
CD44P16070 MIR498-201ENST00000385134 124 ntBASIC8.38□□□□□ -1.07
CD44P16070 MIR569-201ENST00000385228 96 ntBASIC8.38□□□□□ -1.07
CD44P16070 AL353151.1-201ENST00000402406 604 ntBASIC8.38□□□□□ -1.07
CD44P16070 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.38□□□□□ -1.07
CD44P16070 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.38□□□□□ -1.07
CD44P16070 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC8.38□□□□□ -1.07
CD44P16070 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.38□□□□□ -1.07
CD44P16070 RPL23AP12-201ENST00000467573 473 ntBASIC8.38□□□□□ -1.07
CD44P16070 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 AC092436.3-201ENST00000511788 257 ntBASIC8.38□□□□□ -1.07
CD44P16070 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC8.38□□□□□ -1.07
CD44P16070 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC8.38□□□□□ -1.07
CD44P16070 AC009643.1-201ENST00000532030 391 ntBASIC8.38□□□□□ -1.07
CD44P16070 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
CD44P16070 AC013283.1-201ENST00000557282 492 ntBASIC8.38□□□□□ -1.07
CD44P16070 PSMA6P4-201ENST00000603247 718 ntBASIC8.38□□□□□ -1.07
CD44P16070 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CD44P16070 AC073488.8-201ENST00000631952 757 ntBASIC8.38□□□□□ -1.07
CD44P16070 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 HSPA8P18-201ENST00000439846 1928 ntBASIC8.38□□□□□ -1.07
CD44P16070 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 AC005614.1-201ENST00000598952 3653 ntBASIC8.38□□□□□ -1.07
CD44P16070 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.38□□□□□ -1.07
CD44P16070 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.38□□□□□ -1.07
CD44P16070 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.38□□□□□ -1.07
CD44P16070 MTND5P9-201ENST00000503854 1755 ntBASIC8.38□□□□□ -1.07
CD44P16070 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
CD44P16070 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CD44P16070 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 AC138207.6-201ENST00000579164 1967 ntBASIC8.37□□□□□ -1.07
CD44P16070 AC103710.2-202ENST00000641454 2853 ntBASIC8.37□□□□□ -1.07
CD44P16070 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 CDC27P2-201ENST00000425026 1922 ntBASIC8.37□□□□□ -1.07
CD44P16070 AC010332.2-201ENST00000613083 1904 ntBASIC8.37□□□□□ -1.07
CD44P16070 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 RNU6-270P-201ENST00000364131 105 ntBASIC8.37□□□□□ -1.07
CD44P16070 RNU6-755P-201ENST00000364400 103 ntBASIC8.37□□□□□ -1.07
CD44P16070 SNORA62.2-201ENST00000364672 152 ntBASIC8.37□□□□□ -1.07
CD44P16070 AL139327.1-201ENST00000382988 348 ntBASIC8.37□□□□□ -1.07
CD44P16070 MIR186-201ENST00000384988 86 ntBASIC8.37□□□□□ -1.07
CD44P16070 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CD44P16070 EIF5P1-201ENST00000400019 1231 ntBASIC8.37□□□□□ -1.07
CD44P16070 RNA5SP89-201ENST00000410300 108 ntBASIC8.37□□□□□ -1.07
CD44P16070 CTSLP8-201ENST00000413075 967 ntBASIC8.37□□□□□ -1.07
CD44P16070 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.37□□□□□ -1.07
CD44P16070 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.37□□□□□ -1.07
CD44P16070 AP000942.1-201ENST00000463969 747 ntBASIC8.37□□□□□ -1.07
CD44P16070 AC020893.1-201ENST00000502452 580 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms