Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.67□□□□□ -1.34
TOP2AP11388 SNORD9-201ENST00000362566 104 ntBASIC6.67□□□□□ -1.34
TOP2AP11388 PDSS1P1-201ENST00000422953 1114 ntBASIC6.67□□□□□ -1.34
TOP2AP11388 TMX2P1-201ENST00000436507 708 ntBASIC6.67□□□□□ -1.34
TOP2AP11388 SETD6P1-201ENST00000444575 317 ntBASIC6.67□□□□□ -1.34
TOP2AP11388 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.67□□□□□ -1.34
TOP2AP11388 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.67□□□□□ -1.34
TOP2AP11388 AC026427.2-201ENST00000506228 536 ntBASIC6.67□□□□□ -1.34
TOP2AP11388 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
TOP2AP11388 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOP2AP11388 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.67□□□□□ -1.34
TOP2AP11388 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC6.67□□□□□ -1.34
TOP2AP11388 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOP2AP11388 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOP2AP11388 AC007823.1-201ENST00000569932 1566 ntBASIC6.67□□□□□ -1.34
TOP2AP11388 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOP2AP11388 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TOP2AP11388 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TOP2AP11388 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC6.66□□□□□ -1.34
TOP2AP11388 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOP2AP11388 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOP2AP11388 RPL23AP12-201ENST00000467573 473 ntBASIC6.66□□□□□ -1.34
TOP2AP11388 OR7E13P-201ENST00000526052 910 ntBASIC6.66□□□□□ -1.34
TOP2AP11388 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
TOP2AP11388 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOP2AP11388 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TOP2AP11388 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
TOP2AP11388 ATP5JP1-201ENST00000431631 322 ntBASIC6.66□□□□□ -1.34
TOP2AP11388 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.66□□□□□ -1.34
TOP2AP11388 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.66□□□□□ -1.34
TOP2AP11388 IGKV2-38-201ENST00000517443 247 ntBASIC6.66□□□□□ -1.34
TOP2AP11388 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.66□□□□□ -1.34
TOP2AP11388 DEFB109D-201ENST00000529497 240 ntBASIC6.66□□□□□ -1.34
TOP2AP11388 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TOP2AP11388 AC006960.3-201ENST00000561845 705 ntBASIC6.66□□□□□ -1.34
TOP2AP11388 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.66□□□□□ -1.34
TOP2AP11388 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.66□□□□□ -1.34
TOP2AP11388 AC018816.2-201ENST00000621460 353 ntBASIC6.66□□□□□ -1.34
TOP2AP11388 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
TOP2AP11388 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.65□□□□□ -1.34
TOP2AP11388 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.65□□□□□ -1.34
TOP2AP11388 MAPK10-303ENST00000641324 3959 ntBASIC6.65□□□□□ -1.34
TOP2AP11388 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOP2AP11388 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TOP2AP11388 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TOP2AP11388 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.65□□□□□ -1.35
TOP2AP11388 AL158156.1-201ENST00000422509 473 ntBASIC6.65□□□□□ -1.35
TOP2AP11388 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.65□□□□□ -1.35
TOP2AP11388 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.65□□□□□ -1.35
TOP2AP11388 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.65□□□□□ -1.35
TOP2AP11388 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.65□□□□□ -1.35
TOP2AP11388 AC083837.1-201ENST00000565297 2994 ntBASIC6.65□□□□□ -1.35
TOP2AP11388 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC6.65□□□□□ -1.35
TOP2AP11388 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC6.65□□□□□ -1.35
TOP2AP11388 AL354760.1-201ENST00000608357 643 ntBASIC6.65□□□□□ -1.35
TOP2AP11388 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.65□□□□□ -1.35
TOP2AP11388 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.65□□□□□ -1.35
TOP2AP11388 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TOP2AP11388 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
TOP2AP11388 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.64□□□□□ -1.35
TOP2AP11388 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TOP2AP11388 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
TOP2AP11388 CYCSP32-201ENST00000440548 321 ntBASIC6.64□□□□□ -1.35
TOP2AP11388 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.64□□□□□ -1.35
TOP2AP11388 APOOP2-201ENST00000461561 539 ntBASIC6.64□□□□□ -1.35
TOP2AP11388 SNORA70.17-201ENST00000516449 133 ntBASIC6.64□□□□□ -1.35
TOP2AP11388 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.64□□□□□ -1.35
TOP2AP11388 AP000553.6-201ENST00000641242 118 ntBASIC6.64□□□□□ -1.35
TOP2AP11388 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TOP2AP11388 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TOP2AP11388 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TOP2AP11388 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP2AP11388 AC112198.2-201ENST00000426589 6996 ntBASIC6.63□□□□□ -1.35
TOP2AP11388 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP2AP11388 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TOP2AP11388 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.63□□□□□ -1.35
TOP2AP11388 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.63□□□□□ -1.35
TOP2AP11388 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
TOP2AP11388 SNORA70.18-201ENST00000516696 98 ntBASIC6.63□□□□□ -1.35
TOP2AP11388 OR4A12P-201ENST00000530847 918 ntBASIC6.63□□□□□ -1.35
TOP2AP11388 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.63□□□□□ -1.35
TOP2AP11388 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.63□□□□□ -1.35
TOP2AP11388 AL121834.1-201ENST00000572284 509 ntBASIC6.63□□□□□ -1.35
TOP2AP11388 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
TOP2AP11388 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.63□□□□□ -1.35
TOP2AP11388 OR2BH1P-201ENST00000608850 864 ntBASIC6.63□□□□□ -1.35
TOP2AP11388 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.63□□□□□ -1.35
TOP2AP11388 AL139089.1-201ENST00000620372 975 ntBASIC6.63□□□□□ -1.35
TOP2AP11388 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TOP2AP11388 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TOP2AP11388 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.63□□□□□ -1.35
TOP2AP11388 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
TOP2AP11388 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TOP2AP11388 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP2AP11388 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC6.62□□□□□ -1.35
TOP2AP11388 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP2AP11388 Z92545.1-201ENST00000411782 234 ntBASIC6.62□□□□□ -1.35
TOP2AP11388 AC096664.2-201ENST00000411843 406 ntBASIC6.62□□□□□ -1.35
TOP2AP11388 SETP9-201ENST00000423837 832 ntBASIC6.62□□□□□ -1.35
TOP2AP11388 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms