Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
NKX2-2O95096 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NKX2-2O95096 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-2O95096 RNA5SP123-201ENST00000363244 119 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 PRRC2CP1-201ENST00000404428 159 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 U3.35-201ENST00000408405 208 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-2O95096 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 CNOT7P1-201ENST00000429006 852 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-2O95096 CEACAMP1-201ENST00000434624 1035 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AC084290.1-201ENST00000434995 374 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 GTF2IP7-202ENST00000436677 309 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 PRPF38AP2-201ENST00000438179 851 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC112498.1-201ENST00000444401 332 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 GEMIN8P3-201ENST00000445417 720 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 HMGB1P48-201ENST00000446155 598 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-2O95096 OTX2P1-201ENST00000450956 354 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 CCDC75P1-201ENST00000469247 791 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC010683.1-201ENST00000473673 378 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 RPS3AP6-201ENST00000484430 795 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AC020890.1-201ENST00000491837 504 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.49□□□□□ -1.69
NKX2-2O95096 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 RFPL4AP5-201ENST00000514977 504 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.49□□□□□ -1.69
NKX2-2O95096 OR4C2P-201ENST00000530855 1064 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-2O95096 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-2O95096 GCSHP4-201ENST00000538792 439 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC008033.2-201ENST00000542626 177 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-2O95096 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AL121932.1-201ENST00000605542 214 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AC007497.1-201ENST00000610421 561 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AC006386.1-201ENST00000619436 415 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 AC068870.2-201ENST00000620635 389 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-2O95096 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-2O95096 AC093535.2-201ENST00000624769 2326 ntBASIC4.49□□□□□ -1.69
NKX2-2O95096 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.49□□□□□ -1.69
NKX2-2O95096 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-2O95096 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AC010266.2-201ENST00000564741 3255 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AC025574.1-201ENST00000554784 1653 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 CYP1D1P-201ENST00000416662 1433 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 MFSD8-220ENST00000641243 1422 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 RNU4-92P-201ENST00000363783 136 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 GSTA8P-201ENST00000404253 637 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-2O95096 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 LINC00993-201ENST00000420453 540 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-2O95096 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-2O95096 MTCO1P3-201ENST00000429327 192 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-2O95096 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 RPL37P1-201ENST00000432310 284 ntBASIC4.48□□□□□ -1.69
NKX2-2O95096 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms