Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 SNORD39.3-201ENST00000584451 71 ntBASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 AC008536.1-201ENST00000602872 669 ntBASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 AC095055.1-201ENST00000603472 1113 ntBASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 COX6CP4-201ENST00000605798 228 ntBASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 AC000068.2-201ENST00000608816 460 ntBASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 AC008115.3-201ENST00000614874 549 ntBASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 AC007683.2-201ENST00000624681 714 ntBASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 AC017104.4-201ENST00000636283 1592 ntBASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HMGB1P1B2RPK0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC117529.2-201ENST00000512159 2068 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC092638.1-201ENST00000411966 1275 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC000041.1-201ENST00000439655 175 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 RN7SL41P-201ENST00000476144 297 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 TMED11P-201ENST00000479478 690 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 RN7SL568P-201ENST00000493069 298 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 SNORA70.14-201ENST00000516205 110 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AL049872.1-201ENST00000556323 322 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC121758.1-202ENST00000556917 658 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC002487.1-201ENST00000604565 994 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC079395.2-201ENST00000610982 737 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 VN1R74P-201ENST00000613259 503 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 RPSAP73-201ENST00000614820 330 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC090116.1-201ENST00000615679 446 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 MIR6829-201ENST00000620375 67 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC048347.1-201ENST00000624621 427 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 AC055839.1-201ENST00000634467 498 ntBASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGB1P1B2RPK0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 ECM1P2-201ENST00000503354 1577 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 RN7SKP250-201ENST00000363924 321 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 RNU6-207P-201ENST00000384137 107 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 MIR607-201ENST00000385241 96 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 MCTS2P-201ENST00000394552 546 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 LIPT1P1-201ENST00000415870 1186 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 EIF4EP1-201ENST00000422311 642 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 ANP32BP2-201ENST00000454525 545 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 AC048346.1-201ENST00000510247 144 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 RPL7L1P4-201ENST00000513004 707 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 RNU5A-7P-201ENST00000515979 116 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 AC116917.1-201ENST00000520558 305 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 AP004371.1-201ENST00000525240 214 ntBASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGB1P1B2RPK0 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms