Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 OR5M7P-201ENST00000526140 972 ntBASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 AC026979.4-201ENST00000606555 645 ntBASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 MIR7154-201ENST00000620673 73 ntBASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHANK2Q9UPX8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 MARK2P15-201ENST00000432204 2186 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 RN7SKP74-201ENST00000362849 309 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 RPL7P4-203ENST00000430239 730 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 Z74696.2-201ENST00000436514 498 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 AL133162.1-201ENST00000463228 453 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 IGLV3-26-201ENST00000520756 302 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 NPM1P47-201ENST00000560843 856 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 AC012417.1-201ENST00000582307 1039 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 U3.45-201ENST00000607547 219 ntBASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHANK2Q9UPX8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 RNU2-65P-201ENST00000410162 185 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 AL590609.2-201ENST00000421430 368 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 OR6C71P-201ENST00000432580 913 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 RPS17P13-201ENST00000448974 407 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 RN7SL293P-201ENST00000481765 281 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 UBE2CP3-201ENST00000502715 450 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 AC090246.1-201ENST00000616499 426 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 AC009229.4-201ENST00000623854 1947 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 AC112198.2-201ENST00000426589 6996 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 MAPK10-303ENST00000641324 3959 ntBASIC5.9□□□□□ -1.46
SHANK2Q9UPX8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 MTCO1P12-201ENST00000414273 1543 ntBASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 ZNF962P-201ENST00000443465 3140 ntBASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 MIR30B-201ENST00000384850 88 ntBASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 HIGD1AP4-201ENST00000430194 280 ntBASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 AC025554.1-201ENST00000505641 188 ntBASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 AC093853.1-201ENST00000515689 483 ntBASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.9□□□□□ -1.47
SHANK2Q9UPX8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 HSPD1P11-201ENST00000508643 1702 ntBASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 AL035425.3-201ENST00000564206 4996 ntBASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 RNA5SP97-201ENST00000365006 84 ntBASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 AL049873.1-201ENST00000480540 376 ntBASIC5.89□□□□□ -1.47
SHANK2Q9UPX8 RPL7P24-201ENST00000493052 752 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms