Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
NDE1Q9NXR1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NDE1Q9NXR1 HSPD1P11-201ENST00000508643 1702 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC027287.1-201ENST00000553115 1453 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 RAD1P1-201ENST00000231383 813 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 RNU6-1005P-201ENST00000384519 107 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 NPM1P4-201ENST00000414095 812 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 BTF3P9-201ENST00000418784 283 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC099336.2-201ENST00000422457 254 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 VN1R42P-201ENST00000424651 344 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AL158073.1-201ENST00000426848 1104 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC093716.1-201ENST00000435923 377 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 CYCSP11-201ENST00000436426 315 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AL645638.1-201ENST00000440519 361 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 MYO5BP2-201ENST00000449815 1277 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC099560.2-201ENST00000457554 255 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC023141.9-201ENST00000458734 412 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 RN7SL629P-201ENST00000489622 285 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 PRELID3BP7-201ENST00000503606 469 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC025554.1-201ENST00000505641 188 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AP006289.1-201ENST00000538089 277 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC135001.1-201ENST00000544546 283 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC004825.1-201ENST00000555068 586 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC025918.2-201ENST00000558683 763 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AL360157.1-201ENST00000565962 87 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC021483.2-201ENST00000567415 758 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 CBX3P2-202ENST00000583365 535 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 ELOCP28-201ENST00000590044 317 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 SNX6P1-201ENST00000601728 1224 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC068620.3-201ENST00000602749 560 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AL160290.3-201ENST00000604869 165 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC016597.2-201ENST00000613256 341 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC008785.1-201ENST00000624475 456 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 U3.53-201ENST00000628922 216 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 MTCO1P4-201ENST00000520516 1409 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 ZNF137P-201ENST00000456718 1920 ntBASIC4.26□□□□□ -1.73
NDE1Q9NXR1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.26□□□□□ -1.73
NDE1Q9NXR1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 RNA5SP242-201ENST00000364171 118 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 MIR1286-201ENST00000408112 78 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 RNU2-50P-201ENST00000410494 143 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 MIR1911-201ENST00000410783 80 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AL590806.1-201ENST00000415818 853 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AL513325.1-201ENST00000417716 1034 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC234779.1-201ENST00000425910 285 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 RPS6P12-201ENST00000432491 726 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC010733.1-201ENST00000451515 401 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC069277.2-201ENST00000454211 432 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 TVP23BP2-201ENST00000455082 615 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 RN7SL172P-201ENST00000460535 303 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC026348.1-201ENST00000462549 1053 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC018635.1-201ENST00000468292 1030 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC112518.2-201ENST00000508565 425 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC121161.1-201ENST00000510606 652 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.25□□□□□ -1.73
NDE1Q9NXR1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.25□□□□□ -1.73
NDE1Q9NXR1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms