Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.12□□□□□ -1.59
BLOC1S4Q9NUP1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC125257.1-201ENST00000560400 2930 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 OR14L1P-202ENST00000641545 3009 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 RNA5SP397-201ENST00000391323 118 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AL355615.1-201ENST00000406187 641 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 UBE2V1P5-201ENST00000440070 405 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 DNAJC19P8-201ENST00000452887 259 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AL513533.1-201ENST00000453728 415 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC011037.1-201ENST00000483964 558 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 RPL7L1P13-201ENST00000511702 739 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 MIR4270-201ENST00000581799 70 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC006116.7-201ENST00000590141 756 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC010857.1-201ENST00000606398 594 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AC097505.1-201ENST00000610199 565 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 AL136520.1-201ENST00000600311 1322 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 HSPD1P14-201ENST00000432666 1618 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 Z73965.1-201ENST00000623412 2297 ntBASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BLOC1S4Q9NUP1 Z95331.1-201ENST00000623075 23112 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC103591.2-201ENST00000265259 766 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 MIR298-201ENST00000401212 88 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 RN7SKP167-201ENST00000411047 285 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 RPL21P110-201ENST00000433345 446 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC011753.3-201ENST00000443436 406 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 ATP5G1P3-201ENST00000463301 410 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC108751.5-201ENST00000492880 1336 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 HMGB1P21-201ENST00000502313 581 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 MTCO3P27-201ENST00000514397 196 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC010476.1-201ENST00000519111 851 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC068339.2-201ENST00000534395 618 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC139103.1-201ENST00000534696 1030 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC074029.1-201ENST00000552531 1044 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 AC100827.5-201ENST00000615883 426 ntBASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BLOC1S4Q9NUP1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AL139811.1-201ENST00000424779 2299 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 PCAT14-202ENST00000627127 3935 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 RNU6-932P-201ENST00000391108 106 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AL035405.1-201ENST00000400795 710 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC004022.2-201ENST00000413824 193 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 UBE2V1P9-201ENST00000414760 368 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 AC114814.2-201ENST00000419195 485 ntBASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.09□□□□□ -1.59
BLOC1S4Q9NUP1 RAD23BP1-201ENST00000421404 1227 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms