Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 RN7SL267P-201ENST00000485107 261 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC022206.1-201ENST00000495947 347 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 SUMO2P4-201ENST00000504193 276 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 EIF3KP3-201ENST00000514461 639 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 SNORA19.2-201ENST00000516013 114 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 RNU6-714P-201ENST00000516963 103 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 RNU6-201P-201ENST00000517100 61 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC022861.1-201ENST00000522981 663 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 HMGB1P42-201ENST00000532126 553 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 HSPE1P3-201ENST00000559254 309 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC010287.1-201ENST00000566916 357 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC217777.1-201ENST00000570034 1471 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC005668.1-201ENST00000571142 476 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 SNORD39.3-201ENST00000584451 71 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AL133255.1-201ENST00000606374 441 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 SNORD96A-201ENST00000606577 79 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC078899.5-201ENST00000612475 178 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC027559.1-201ENST00000636288 271 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC022031.1-201ENST00000585985 2593 ntBASIC6.12□□□□□ -1.43
BHLHE41Q9C0J9 AC097504.1-201ENST00000515103 2415 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 SAGE3P-201ENST00000619800 1635 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 RNU6-223P-201ENST00000362830 107 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AL391419.1-201ENST00000398901 1275 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AL034417.1-201ENST00000399343 800 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AL162578.1-201ENST00000406202 378 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AL354719.1-201ENST00000406535 843 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 U3.43-201ENST00000410734 213 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 RNU6-1068P-201ENST00000410958 103 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC116036.1-201ENST00000412199 367 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 TPMTP2-201ENST00000414372 726 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC023274.2-201ENST00000445264 521 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 GAPDHP14-201ENST00000450472 937 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC009244.1-201ENST00000450566 258 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AL645937.3-201ENST00000453647 936 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC026410.2-201ENST00000460281 156 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC073594.1-201ENST00000462065 364 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC106800.3-201ENST00000511389 308 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 RNA5SP401-201ENST00000515920 127 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 RNU7-30P-201ENST00000516835 62 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 COX6CP8-201ENST00000522620 226 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC008127.2-201ENST00000549925 1075 ntBASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.11□□□□□ -1.43
BHLHE41Q9C0J9 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms