Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL356276.2-201ENST00000435919 558 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC092809.1-201ENST00000441469 474 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 TVP23CP1-201ENST00000450317 639 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 Y_RNA.653-201ENST00000459091 95 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC005550.2-201ENST00000476382 318 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC231760.1-201ENST00000498002 260 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 RNU2-53P-201ENST00000516257 147 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 Vault.3-201ENST00000516676 95 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 RN7SKP2-201ENST00000517003 319 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 HMGB1P23-201ENST00000518743 568 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC044860.2-201ENST00000561005 179 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 SNORD95-201ENST00000579879 68 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC011626.1-201ENST00000604710 562 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AL121612.2-201ENST00000612261 482 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AL121809.2-201ENST00000613169 341 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC018926.3-201ENST00000618841 406 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AL731566.2-201ENST00000618971 317 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC024884.1-201ENST00000620583 399 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AL034417.4-202ENST00000642135 2236 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 TMEM75-201ENST00000624314 2165 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC020904.2-202ENST00000614660 1401 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MTCO1P14-201ENST00000441695 1559 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC092111.1-201ENST00000618256 3358 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 RNU6-1188P-201ENST00000363795 107 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 Y_RNA.364-201ENST00000365532 101 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MIR548K-201ENST00000408406 116 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC127391.1-201ENST00000411737 98 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 SETP5-201ENST00000437270 562 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 RPS15AP9-201ENST00000439856 381 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 COL11A2P1-205ENST00000441798 676 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AL121871.1-201ENST00000443413 436 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 SNRPBP1-201ENST00000443634 282 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 RPSAP7-201ENST00000456871 885 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 BTF3P5-201ENST00000457252 467 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 NF1P3-201ENST00000457709 450 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC008571.1-201ENST00000467232 300 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 PABPC1P1-201ENST00000506347 591 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC027309.2-201ENST00000520566 192 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 NMNAT1P1-201ENST00000554095 876 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MIR548AI-201ENST00000579940 88 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC018690.1-201ENST00000608144 626 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AL589743.6-201ENST00000611025 117 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AL133173.2-201ENST00000614270 90 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 AC018445.2-201ENST00000622987 260 ntBASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNTNAP3Q9BZ76 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms