Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TPM3P3-201ENST00000521343 354 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC138832.1-201ENST00000522871 556 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 FAM92A1P1-201ENST00000528023 890 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 RPS3AP23-202ENST00000574601 686 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC090312.2-201ENST00000582687 378 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC009977.1-201ENST00000586015 570 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC022432.1-201ENST00000595739 310 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC011497.2-201ENST00000600255 639 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 BNIP3P10-201ENST00000605360 577 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC135507.2-201ENST00000612443 309 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 RNA5SP440-201ENST00000612665 119 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 TCL6_3.1-201ENST00000619064 137 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 MIR193BHG-214ENST00000641765 509 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AL121768.1-201ENST00000613917 2544 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC079097.1-201ENST00000512187 1399 ntBASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CCDC85AQ96PX6 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 Y_RNA.25-201ENST00000362528 102 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 RNU6-216P-201ENST00000363282 104 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 RNU6-1103P-201ENST00000384150 107 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 U8.14-201ENST00000390843 143 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AL589647.1-201ENST00000402485 466 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AL035410.1-201ENST00000427409 427 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 HSPD1P12-201ENST00000429127 1069 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 USP9YP9-201ENST00000429406 715 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 RPS7P3-201ENST00000443360 580 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 GAPDHP17-201ENST00000449858 1001 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC114981.1-201ENST00000503897 678 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC098799.3-201ENST00000506095 438 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AP000648.1-201ENST00000529682 397 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 TRAV15-201ENST00000556680 249 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC020910.2-201ENST00000603635 610 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC069304.2-201ENST00000605154 435 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AC116667.2-201ENST00000641075 823 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC85AQ96PX6 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms