Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC004948.1-201ENST00000609858 672 ntBASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 AL445528.2-201ENST00000620582 470 ntBASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 AC024595.1-201ENST00000623088 387 ntBASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 U6.107-201ENST00000637108 79 ntBASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 AC009452.1-201ENST00000640823 606 ntBASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDLIM5Q96HC4 LINC00622-201ENST00000562811 1570 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 RNA5SP372-201ENST00000390836 115 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 RNU6-1176P-201ENST00000390955 107 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AL035419.1-201ENST00000397037 564 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AL359265.2-201ENST00000434367 631 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 RPL6P5-201ENST00000445678 828 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 RPL7P61-201ENST00000451721 751 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 EIF2S2P5-201ENST00000457635 968 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 MTATP6P22-201ENST00000507369 598 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC069304.3-201ENST00000603938 1084 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC026790.2-201ENST00000606282 430 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AP002360.3-201ENST00000607673 710 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 AC091905.2-201ENST00000623143 306 ntBASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDLIM5Q96HC4 CPHL1P-201ENST00000461341 3407 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC046144.1-201ENST00000478559 1853 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC120338.1-201ENST00000625074 1541 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC025125.1-201ENST00000624743 1922 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC021146.4-201ENST00000309229 279 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AL590240.1-201ENST00000334118 313 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 RNA5SP397-201ENST00000391323 118 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 HMGB3P18-201ENST00000406327 590 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 OR5AW1P-201ENST00000426334 1006 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 RPL36AP15-201ENST00000444514 266 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AL645937.3-201ENST00000453647 936 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AL035407.2-201ENST00000454090 378 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 RN7SL41P-201ENST00000476144 297 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC008897.1-201ENST00000494006 347 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 RPL7L1P13-201ENST00000511702 739 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 OR5D15P-201ENST00000531671 942 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC008759.1-201ENST00000589783 983 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AC067852.4-201ENST00000590314 478 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 ZNF92P2-201ENST00000600543 1059 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 AF230666.2-201ENST00000602328 725 ntBASIC4.47□□□□□ -1.69
PDLIM5Q96HC4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms