Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC006338.2-201ENST00000616864 791 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ERCC4Q92889 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ERCC4Q92889 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
ERCC4Q92889 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 AC023421.1-201ENST00000590535 1785 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AC027228.2-201ENST00000567141 2154 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.46
ERCC4Q92889 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC4Q92889 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC4Q92889 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC4Q92889 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC4Q92889 RNU6-666P-201ENST00000363499 107 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.9□□□□□ -1.46
ERCC4Q92889 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC4Q92889 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC4Q92889 RNA5SP498-201ENST00000411342 120 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AC105402.1-201ENST00000413336 545 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC4Q92889 AC007435.1-201ENST00000421086 415 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC4Q92889 MTCO1P3-201ENST00000429327 192 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC4Q92889 PRELID3BP10-201ENST00000431957 584 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 CLUHP1-201ENST00000435012 1190 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AC009263.1-201ENST00000441193 1239 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 RPS26P30-201ENST00000443431 335 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AP000281.1-201ENST00000444036 316 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC4Q92889 GAPDHP36-201ENST00000480688 918 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC4Q92889 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC4Q92889 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC4Q92889 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC4Q92889 AC106872.4-201ENST00000510050 523 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC4Q92889 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC4Q92889 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.9□□□□□ -1.46
ERCC4Q92889 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.9□□□□□ -1.46
ERCC4Q92889 AP002373.2-201ENST00000541631 1060 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.9□□□□□ -1.46
ERCC4Q92889 AL358913.1-201ENST00000554342 121 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.9□□□□□ -1.46
ERCC4Q92889 SS18L2P2-201ENST00000583960 235 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.9□□□□□ -1.46
ERCC4Q92889 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC4Q92889 AC069545.1-201ENST00000605671 358 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AC245297.2-201ENST00000610119 565 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 RNA5SP440-201ENST00000612665 119 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 RN7SL787P-201ENST00000613000 284 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC4Q92889 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AF246928.1-201ENST00000623768 87 ntBASIC5.9□□□□□ -1.46
ERCC4Q92889 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC4Q92889 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC4Q92889 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.9□□□□□ -1.47
ERCC4Q92889 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.9□□□□□ -1.47
ERCC4Q92889 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.9□□□□□ -1.47
ERCC4Q92889 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.9□□□□□ -1.47
ERCC4Q92889 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
ERCC4Q92889 MTND4P26-201ENST00000415971 1359 ntBASIC5.9□□□□□ -1.47
ERCC4Q92889 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
ERCC4Q92889 AC083843.3-201ENST00000623679 2186 ntBASIC5.9□□□□□ -1.47
ERCC4Q92889 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.9□□□□□ -1.47
ERCC4Q92889 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.9□□□□□ -1.47
ERCC4Q92889 AC092104.1-201ENST00000497346 1441 ntBASIC5.9□□□□□ -1.47
ERCC4Q92889 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.47
ERCC4Q92889 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ERCC4Q92889 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.89□□□□□ -1.47
ERCC4Q92889 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 CR381670.1-201ENST00000624291 1693 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 AC100778.3-201ENST00000580060 1750 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ERCC4Q92889 RNU6-98P-201ENST00000384173 107 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 RNU1-77P-201ENST00000390868 162 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 RN7SKP293-201ENST00000411389 296 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 CHEK2P5-201ENST00000423877 246 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC4Q92889 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.89□□□□□ -1.47
ERCC4Q92889 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC4Q92889 USP9YP31-201ENST00000431405 881 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 RPL7P29-201ENST00000437151 728 ntBASIC5.89□□□□□ -1.47
ERCC4Q92889 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms