Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC38A9Q8NBW4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC38A9Q8NBW4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SLC38A9Q8NBW4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC38A9Q8NBW4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC009313.2-201ENST00000417893 1941 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 OR4K15-201ENST00000305051 1216 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 SNORD113.2-201ENST00000364166 89 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 RPS3AP23-201ENST00000401762 784 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 MTATP6P20-201ENST00000414147 562 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 ATG4AP1-201ENST00000416893 538 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 DNAJC19P8-201ENST00000452887 259 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC093166.2-201ENST00000455969 1017 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 METTL15P1-201ENST00000481421 1045 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AK3P4-201ENST00000504283 583 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 HMGB1P23-201ENST00000518743 568 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 OR8G5-201ENST00000524943 1041 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AL132857.1-201ENST00000555180 708 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 MIR5096-201ENST00000583713 70 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 EIF1P6-201ENST00000600054 334 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AL160237.3-201ENST00000604114 1013 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC009948.4-201ENST00000604692 675 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 VN1R74P-201ENST00000613259 503 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC004232.3-201ENST00000622977 525 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC104985.3-201ENST00000623479 597 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC090506.2-201ENST00000624521 419 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 BTBD10P1-201ENST00000549824 1352 ntBASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC38A9Q8NBW4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 NEAT1-202ENST00000501122 22743 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 ANKRD36P1-201ENST00000344424 659 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 RNU4-44P-201ENST00000363050 141 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 OR51B3P-201ENST00000412287 913 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 AC009480.2-201ENST00000422916 432 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 NANOGP5-201ENST00000424456 877 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 CENPIP1-201ENST00000425713 902 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 RPL23AP1-201ENST00000428990 471 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 PTGES3P1-201ENST00000439531 483 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 AC244505.3-201ENST00000454598 187 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 CDC42P1-201ENST00000456658 548 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 AC005229.2-201ENST00000456995 399 ntBASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SLC38A9Q8NBW4 RNU7-140P-201ENST00000459546 60 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms