Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 TRAV35-201ENST00000390462 330 ntBASIC6.03□□□□□ -1.44
VPS8Q8N3P4 AL390879.2-203ENST00000426943 1121 ntBASIC6.03□□□□□ -1.44
VPS8Q8N3P4 UBDP1-202ENST00000457888 382 ntBASIC6.03□□□□□ -1.44
VPS8Q8N3P4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 AL133247.2-201ENST00000603236 482 ntBASIC6.03□□□□□ -1.44
VPS8Q8N3P4 AL137849.1-201ENST00000604767 169 ntBASIC6.03□□□□□ -1.44
VPS8Q8N3P4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 ZNF962P-201ENST00000443465 3140 ntBASIC6.03□□□□□ -1.44
VPS8Q8N3P4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS8Q8N3P4 AC125336.1-201ENST00000508893 2827 ntBASIC6.02□□□□□ -1.44
VPS8Q8N3P4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 SNORD74.4-201ENST00000364129 80 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 MIR554-201ENST00000384874 96 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 RNU6ATAC-201ENST00000408749 126 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 OR2X1P-201ENST00000421144 687 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 AC018644.1-201ENST00000429934 551 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 AP002812.1-201ENST00000495378 474 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 MIR3158-1-201ENST00000583596 81 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 AC079298.2-201ENST00000623885 459 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 ATE1-AS1-202ENST00000636460 506 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 AC139426.3-201ENST00000605648 2059 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS8Q8N3P4 BTBD10P1-201ENST00000549824 1352 ntBASIC6.02□□□□□ -1.45
VPS8Q8N3P4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AL359837.1-201ENST00000381357 287 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 BMS1P19-201ENST00000433925 393 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC007389.2-201ENST00000434630 306 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC104306.1-201ENST00000449702 371 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 EIF2S2P5-201ENST00000457635 968 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC022336.1-201ENST00000475510 337 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC025445.1-201ENST00000502728 300 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 SNORA62.6-201ENST00000606322 83 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 MIR92B-201ENST00000607575 96 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AL139089.1-201ENST00000620372 975 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AC083843.3-201ENST00000623679 2186 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 AP004289.2-201ENST00000444413 1457 ntBASIC6.01□□□□□ -1.45
VPS8Q8N3P4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS8Q8N3P4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS8Q8N3P4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
VPS8Q8N3P4 RNA5SP171-201ENST00000391071 115 ntBASIC6□□□□□ -1.45
VPS8Q8N3P4 ZNF602P-201ENST00000405929 924 ntBASIC6□□□□□ -1.45
VPS8Q8N3P4 UBE2CP3-201ENST00000502715 450 ntBASIC6□□□□□ -1.45
VPS8Q8N3P4 AC011270.1-201ENST00000558606 583 ntBASIC6□□□□□ -1.45
VPS8Q8N3P4 MIR5187-201ENST00000583479 76 ntBASIC6□□□□□ -1.45
VPS8Q8N3P4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC6□□□□□ -1.45
VPS8Q8N3P4 LINC01109-201ENST00000603837 3081 ntBASIC6□□□□□ -1.45
VPS8Q8N3P4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS8Q8N3P4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6□□□□□ -1.45
VPS8Q8N3P4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS8Q8N3P4 RN7SKP202-201ENST00000410439 330 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 SNORA57.3-201ENST00000411095 141 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AC087650.1-201ENST00000431445 468 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AL353748.1-201ENST00000440753 474 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 OR4A12P-201ENST00000530847 918 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AC026368.1-201ENST00000614934 690 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AC006042.3-201ENST00000454684 1469 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AC006484.1-201ENST00000435086 1884 ntBASIC5.99□□□□□ -1.45
VPS8Q8N3P4 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS8Q8N3P4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms