Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AP002812.4-201ENST00000532139 286 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC107918.3-201ENST00000533272 382 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC005868.1-201ENST00000536421 331 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 LRRC34P1-201ENST00000542742 915 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 POLR2KP1-201ENST00000553226 168 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 CYP2C60P-201ENST00000566088 139 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL357094.1-201ENST00000603845 844 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 MIR7973-1-201ENST00000614683 76 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AP000346.3-201ENST00000622821 210 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AP000676.4-201ENST00000624659 623 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 U6.107-201ENST00000637108 79 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC079741.1-201ENST00000321498 212 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 IGKV7-3-201ENST00000357453 298 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 RNU6-224P-201ENST00000384055 107 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 RNU6-549P-201ENST00000384433 107 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 RNU6-603P-201ENST00000411403 107 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 RPS7P9-201ENST00000414704 586 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 TAF13P2-201ENST00000416876 286 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC245028.1-201ENST00000423259 256 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC092634.2-201ENST00000428146 1010 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AL031663.1-201ENST00000437445 219 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 RPL35AP21-201ENST00000437667 333 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC011753.3-201ENST00000443436 406 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 TPT1P13-201ENST00000449760 499 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 ZNF886P-201ENST00000450781 723 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 CDC42P1-201ENST00000456658 548 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 MTCO3P35-201ENST00000485582 781 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC008565.1-201ENST00000509046 885 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 RFPL4AP5-201ENST00000514977 504 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 PRELID3BP4-201ENST00000515476 571 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 IGKV1-32-201ENST00000519290 311 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 OR5M2P-201ENST00000529003 936 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC023824.3-201ENST00000569003 562 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC010200.2-201ENST00000605098 235 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC009464.1-201ENST00000615731 469 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC006386.1-201ENST00000619436 415 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 AC092376.2-201ENST00000622621 4116 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 MFSD8-220ENST00000641243 1422 ntBASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4BQ8IWT1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms