Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SL649P-201ENST00000496974 275 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 OR8A2P-201ENST00000528631 952 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 OR5D15P-201ENST00000531671 942 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AL845552.1-201ENST00000556820 323 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SL270P-201ENST00000579643 281 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 SS18L2P2-201ENST00000583960 235 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC015818.6-201ENST00000584274 634 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC036176.3-201ENST00000602456 418 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC008782.1-201ENST00000603386 430 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC011468.4-201ENST00000603942 409 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 MIR6889-201ENST00000613185 59 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC005514.1-201ENST00000623521 208 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC010149.2-201ENST00000637608 315 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 PPBPP2-201ENST00000513150 1362 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC093909.5-201ENST00000621839 1799 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC105114.1-201ENST00000624795 1862 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RNU6-1026P-201ENST00000384465 108 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 MIR191-201ENST00000384873 92 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 FDPSP5-201ENST00000399474 1057 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SKP296-201ENST00000411185 341 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RPS12P24-201ENST00000412619 387 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AL357752.1-201ENST00000412817 349 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RBMY2KP-201ENST00000418221 992 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC019097.1-201ENST00000424783 735 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RPEP4-201ENST00000437636 602 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC090142.1-201ENST00000465776 462 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC010301.1-201ENST00000473936 355 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC025164.1-201ENST00000496249 478 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AL390198.2-201ENST00000510553 222 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC107222.1-201ENST00000510899 637 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SKP196-201ENST00000516267 345 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 RNU6-201P-201ENST00000517100 61 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 MIR5095-201ENST00000578844 88 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC091133.5-201ENST00000603088 301 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AL008723.3-201ENST00000608926 449 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC023509.5-201ENST00000617434 807 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC018926.3-201ENST00000618841 406 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 AC090017.1-201ENST00000548612 1779 ntBASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LYSMD3Q7Z3D4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LYSMD3Q7Z3D4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms