Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AL359091.1-201ENST00000449048 1734 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 BX322650.1-201ENST00000332359 2143 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AC006600.2-201ENST00000624834 2506 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RNA5SP375-201ENST00000362975 119 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RNU6-1322P-201ENST00000364309 107 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RNY4P34-201ENST00000364779 95 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 SPTLC1P2-201ENST00000407089 121 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RNU6-373P-201ENST00000411247 98 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AL596448.1-201ENST00000415024 392 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AC113618.1-201ENST00000416747 285 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RPL36P18-201ENST00000419316 318 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 MTCYBP8-201ENST00000422855 651 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 DSTNP5-201ENST00000427921 523 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RPL7P54-201ENST00000438336 674 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 COX6CP18-201ENST00000448769 222 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 SIAH1P1-201ENST00000479411 923 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AL049870.4-201ENST00000555741 486 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AL845331.3-202ENST00000562856 261 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 MIR3682-201ENST00000581338 84 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 BNIP3P4-201ENST00000604946 565 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AL021918.2-201ENST00000613415 194 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AC092650.2-201ENST00000619984 902 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AC063952.1-203ENST00000634410 658 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 AC235565.1-201ENST00000456962 1325 ntBASIC7.66□□□□□ -1.18
RC3H1Q5TC82 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
RC3H1Q5TC82 MROH3P-201ENST00000435735 2676 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 Y_RNA.193-201ENST00000363979 102 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 Y_RNA.387-201ENST00000383918 102 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 Y_RNA.618-201ENST00000410949 107 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 OR2AT2P-201ENST00000413438 905 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC245054.2-201ENST00000415639 319 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 SETP9-201ENST00000423837 832 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms