Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RPS3AP61247 PART1_2.1-201ENST00000612397 250 ntBASIC4.71□□□□□ -1.66
RPS3AP61247 RPSAP73-201ENST00000614820 330 ntBASIC4.71□□□□□ -1.66
RPS3AP61247 SNX18P1Y-201ENST00000616231 511 ntBASIC4.71□□□□□ -1.66
RPS3AP61247 AC123767.1-202ENST00000620407 817 ntBASIC4.71□□□□□ -1.66
RPS3AP61247 AC023510.2-201ENST00000622162 746 ntBASIC4.71□□□□□ -1.66
RPS3AP61247 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.71□□□□□ -1.66
RPS3AP61247 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.71□□□□□ -1.66
RPS3AP61247 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.71□□□□□ -1.66
RPS3AP61247 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPS3AP61247 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.71□□□□□ -1.66
RPS3AP61247 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPS3AP61247 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPS3AP61247 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.71□□□□□ -1.66
RPS3AP61247 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RPS3AP61247 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPS3AP61247 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPS3AP61247 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RPS3AP61247 AC023421.1-201ENST00000590535 1785 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RPS3AP61247 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RPS3AP61247 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.7□□□□□ -1.66
RPS3AP61247 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 RNA5SP391-201ENST00000363456 119 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 SNORA74A-201ENST00000364089 198 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
RPS3AP61247 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 RNU6-224P-201ENST00000384055 107 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 MIR589-201ENST00000385238 99 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RPS3AP61247 TMSB4XP8-201ENST00000402089 135 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 SFR1P1-201ENST00000403720 688 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 SPTLC1P2-201ENST00000407089 121 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 U3.36-201ENST00000408418 213 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 RNU6-575P-201ENST00000411326 105 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AL160275.2-201ENST00000412010 394 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.7□□□□□ -1.66
RPS3AP61247 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.7□□□□□ -1.66
RPS3AP61247 TMSB4XP6-201ENST00000415187 135 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 TMSB4XP1-201ENST00000424567 135 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.7□□□□□ -1.66
RPS3AP61247 AC005033.1-201ENST00000428904 813 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.7□□□□□ -1.66
RPS3AP61247 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.7□□□□□ -1.66
RPS3AP61247 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.7□□□□□ -1.66
RPS3AP61247 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.7□□□□□ -1.66
RPS3AP61247 ARL4AP3-201ENST00000441452 574 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 RRM2P4-201ENST00000441721 562 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 HMGB3P9-201ENST00000441799 583 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 EEF1B2P5-201ENST00000444820 548 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AL035090.1-201ENST00000454835 332 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AC005008.1-201ENST00000456151 612 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 GAPDHP39-201ENST00000481866 979 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AC011037.1-201ENST00000483964 558 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.7□□□□□ -1.66
RPS3AP61247 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.7□□□□□ -1.66
RPS3AP61247 OR5M14P-201ENST00000506803 618 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.7□□□□□ -1.66
RPS3AP61247 RNU6-488P-201ENST00000515918 99 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 RN7SKP260-201ENST00000516907 149 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.7□□□□□ -1.66
RPS3AP61247 AC027308.1-201ENST00000517993 110 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AC023632.1-201ENST00000518463 375 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.7□□□□□ -1.66
RPS3AP61247 OR7E13P-201ENST00000526052 910 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 HMGN2P6-201ENST00000551091 273 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AC074029.1-201ENST00000552531 1044 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 MTCYBP23-201ENST00000558717 1102 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.7□□□□□ -1.66
RPS3AP61247 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 RN7SL708P-201ENST00000580952 299 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.7□□□□□ -1.66
RPS3AP61247 AL020997.3-201ENST00000602843 359 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 RPP40P2-201ENST00000603596 712 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 AC027449.1-201ENST00000608890 407 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 MIR6864-201ENST00000617935 70 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.7□□□□□ -1.66
RPS3AP61247 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 AL355852.1-201ENST00000454081 1771 ntBASIC4.7□□□□□ -1.66
RPS3AP61247 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPS3AP61247 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
RPS3AP61247 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPS3AP61247 LINC01355-201ENST00000566551 5444 ntBASIC4.69□□□□□ -1.66
RPS3AP61247 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPS3AP61247 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPS3AP61247 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RPS3AP61247 OR52B1P-201ENST00000316506 909 ntBASIC4.69□□□□□ -1.66
RPS3AP61247 RPL23P2-201ENST00000320371 421 ntBASIC4.69□□□□□ -1.66
RPS3AP61247 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPS3AP61247 U3.2-201ENST00000362981 210 ntBASIC4.69□□□□□ -1.66
RPS3AP61247 RNU4-51P-201ENST00000364206 140 ntBASIC4.69□□□□□ -1.66
RPS3AP61247 RNA5SP90-201ENST00000364801 99 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms