Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL442639.1-201ENST00000625030 1899 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDL3P58872 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDL3P58872 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDL3P58872 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDL3P58872 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
RHBDL3P58872 OR4K15-201ENST00000305051 1216 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDL3P58872 RN7SKP74-201ENST00000362849 309 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
RHBDL3P58872 RNU6-298P-201ENST00000390888 96 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 ATG4AP1-201ENST00000416893 538 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 DNAJC19P7-201ENST00000428811 344 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDL3P58872 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDL3P58872 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.73□□□□□ -1.49
RHBDL3P58872 RPL7P31-201ENST00000450192 724 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AC126121.1-201ENST00000482313 553 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 AC011037.1-201ENST00000483964 558 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AC091860.1-201ENST00000505723 432 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 AC118282.2-201ENST00000508739 374 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.73□□□□□ -1.49
RHBDL3P58872 RNU6-488P-201ENST00000515918 99 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 RNU6-513P-201ENST00000516104 104 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDL3P58872 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDL3P58872 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDL3P58872 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AC017100.2-201ENST00000584628 355 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.73□□□□□ -1.49
RHBDL3P58872 AC010857.1-201ENST00000606398 594 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 AP003485.1-201ENST00000625093 753 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RHBDL3P58872 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDL3P58872 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDL3P58872 AC009643.2-201ENST00000603543 1448 ntBASIC5.73□□□□□ -1.49
RHBDL3P58872 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RHBDL3P58872 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDL3P58872 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
RHBDL3P58872 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDL3P58872 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 SNORD113.2-201ENST00000364166 89 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 RNU6-1151P-201ENST00000384684 107 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 MIR16-1-201ENST00000385271 89 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 AL603865.2-201ENST00000401679 213 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 RAB28P1-201ENST00000411517 641 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC079809.1-201ENST00000415468 276 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 RPL23AP1-201ENST00000428990 471 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 AL136231.1-201ENST00000429407 730 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 RPS17P8-201ENST00000434525 335 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 MTATP6P14-201ENST00000455189 673 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 snoU13.1-201ENST00000459157 104 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDL3P58872 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 RNU6-416P-201ENST00000516265 103 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 RNU6-1028P-201ENST00000517164 93 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 RN7SKP92-201ENST00000517266 244 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 LRRC6P1-201ENST00000532188 885 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 NIFKP8-201ENST00000560500 874 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC093249.4-201ENST00000564755 259 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.72□□□□□ -1.49
RHBDL3P58872 AC019193.2-201ENST00000610012 634 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 FRG1EP-201ENST00000634469 770 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RHBDL3P58872 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
RHBDL3P58872 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.72□□□□□ -1.49
RHBDL3P58872 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RHBDL3P58872 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms