Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLRN1P58418 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLRN1P58418 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 AC104964.3-201ENST00000606115 2860 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC025470.1-201ENST00000510053 2032 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 TEX21P-201ENST00000447107 1476 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLRN1P58418 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLRN1P58418 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 AC092681.1-201ENST00000297369 291 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 MIR375-201ENST00000362103 64 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 RNA5SP326-201ENST00000363209 110 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 RNU6-216P-201ENST00000363282 104 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 RNU6-115P-201ENST00000364310 107 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.02□□□□□ -1.61
CLRN1P58418 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLRN1P58418 RNU6-1122P-201ENST00000384449 107 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 RNU11-201ENST00000387069 134 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 OR6C69P-201ENST00000394268 893 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AL450338.1-201ENST00000407987 512 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC234782.4-201ENST00000417646 1048 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 AL512649.1-201ENST00000428997 581 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.02□□□□□ -1.61
CLRN1P58418 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.02□□□□□ -1.61
CLRN1P58418 MTATP6P23-201ENST00000440153 476 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.02□□□□□ -1.61
CLRN1P58418 MTND2P20-201ENST00000440805 661 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.02□□□□□ -1.61
CLRN1P58418 SLC31A1P1-201ENST00000451221 567 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AL358876.1-201ENST00000453364 1075 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 SNORD125-201ENST00000459538 96 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 RN7SL284P-201ENST00000498823 275 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 IGHV3-32-201ENST00000519182 355 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC018442.3-201ENST00000523025 183 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.02□□□□□ -1.61
CLRN1P58418 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLRN1P58418 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.02□□□□□ -1.61
CLRN1P58418 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.02□□□□□ -1.61
CLRN1P58418 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 MIR4311-201ENST00000580794 100 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.02□□□□□ -1.61
CLRN1P58418 AP001004.1-201ENST00000582468 324 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.02□□□□□ -1.61
CLRN1P58418 AL360012.1-201ENST00000602813 131 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 TAS2R6P-201ENST00000605022 826 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC005084.1-201ENST00000605160 304 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 AL589743.7-201ENST00000612637 233 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC015712.7-201ENST00000615211 635 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 RN7SL544P-201ENST00000617232 284 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 RN7SL763P-201ENST00000620922 284 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 AC129915.3-201ENST00000634128 948 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLRN1P58418 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLRN1P58418 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 AC114786.1-201ENST00000512892 1415 ntBASIC5.02□□□□□ -1.61
CLRN1P58418 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CLRN1P58418 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLRN1P58418 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CLRN1P58418 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
CLRN1P58418 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLRN1P58418 AC144833.1-201ENST00000567953 4089 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms