Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RPL12P28-201ENST00000430852 489 ntBASIC4□□□□□ -1.77
GTF2A1P52655 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4□□□□□ -1.77
GTF2A1P52655 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4□□□□□ -1.77
GTF2A1P52655 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4□□□□□ -1.77
GTF2A1P52655 RPS20P32-201ENST00000456044 356 ntBASIC4□□□□□ -1.77
GTF2A1P52655 RPS27P29-201ENST00000463110 252 ntBASIC4□□□□□ -1.77
GTF2A1P52655 RPS4XP22-201ENST00000480755 780 ntBASIC4□□□□□ -1.77
GTF2A1P52655 RPL36AP41-201ENST00000493820 306 ntBASIC4□□□□□ -1.77
GTF2A1P52655 SCARNA22-201ENST00000503991 125 ntBASIC4□□□□□ -1.77
GTF2A1P52655 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4□□□□□ -1.77
GTF2A1P52655 BTF3P13-201ENST00000513224 490 ntBASIC4□□□□□ -1.77
GTF2A1P52655 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4□□□□□ -1.77
GTF2A1P52655 ATP5LP3-201ENST00000514223 304 ntBASIC4□□□□□ -1.77
GTF2A1P52655 RN7SKP83-201ENST00000516512 178 ntBASIC4□□□□□ -1.77
GTF2A1P52655 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4□□□□□ -1.77
GTF2A1P52655 TRAV37-201ENST00000553906 342 ntBASIC4□□□□□ -1.77
GTF2A1P52655 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4□□□□□ -1.77
GTF2A1P52655 ZNF192P1-203ENST00000565888 810 ntBASIC4□□□□□ -1.77
GTF2A1P52655 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4□□□□□ -1.77
GTF2A1P52655 MIR4716-201ENST00000579628 84 ntBASIC4□□□□□ -1.77
GTF2A1P52655 MIR1269B-201ENST00000580405 75 ntBASIC4□□□□□ -1.77
GTF2A1P52655 AL391358.1-201ENST00000605342 190 ntBASIC4□□□□□ -1.77
GTF2A1P52655 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4□□□□□ -1.77
GTF2A1P52655 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GTF2A1P52655 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4□□□□□ -1.77
GTF2A1P52655 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
GTF2A1P52655 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4□□□□□ -1.77
GTF2A1P52655 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4□□□□□ -1.77
GTF2A1P52655 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GTF2A1P52655 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.99□□□□□ -1.77
GTF2A1P52655 AP002001.2-201ENST00000529025 1469 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GTF2A1P52655 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.99□□□□□ -1.77
GTF2A1P52655 AC119744.1-201ENST00000454746 1715 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GTF2A1P52655 RNU4-4P-201ENST00000364588 130 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 RSU1P3-201ENST00000412878 835 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 AC140479.3-201ENST00000418944 1126 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
GTF2A1P52655 ELOCP10-201ENST00000440624 327 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 TXNP2-201ENST00000443918 295 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 AC144530.1-201ENST00000452862 555 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 RAD23BP3-201ENST00000454157 1152 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.99□□□□□ -1.77
GTF2A1P52655 AC092451.1-201ENST00000480211 153 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.99□□□□□ -1.77
GTF2A1P52655 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.99□□□□□ -1.77
GTF2A1P52655 SNX5P1-201ENST00000505757 1041 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.99□□□□□ -1.77
GTF2A1P52655 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.99□□□□□ -1.77
GTF2A1P52655 AC013701.1-201ENST00000522657 465 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
GTF2A1P52655 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.99□□□□□ -1.77
GTF2A1P52655 AC092747.2-201ENST00000545069 983 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.99□□□□□ -1.77
GTF2A1P52655 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.99□□□□□ -1.77
GTF2A1P52655 AC010547.7-201ENST00000570323 333 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.99□□□□□ -1.77
GTF2A1P52655 ELOCP34-201ENST00000604436 327 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.99□□□□□ -1.77
GTF2A1P52655 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.99□□□□□ -1.77
GTF2A1P52655 CFTRP2-201ENST00000634304 199 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 OR6C71P-202ENST00000641886 1107 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
GTF2A1P52655 PWAR6-201ENST00000552334 4618 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 GABPAP-201ENST00000419271 1356 ntBASIC3.99□□□□□ -1.77
GTF2A1P52655 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AC021755.1-201ENST00000559747 1447 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 RNA5SP191-201ENST00000362585 102 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 U8.4-201ENST00000363626 134 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 RN7SKP15-201ENST00000364742 309 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GTF2A1P52655 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.98□□□□□ -1.77
GTF2A1P52655 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AC093162.1-201ENST00000419682 124 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 CHEK2P5-201ENST00000423877 246 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GTF2A1P52655 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AC104763.1-201ENST00000475274 360 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 RNA5SP92-201ENST00000516437 110 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AP001880.2-201ENST00000538233 448 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AC090888.3-201ENST00000558917 509 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.98□□□□□ -1.77
GTF2A1P52655 BPIFA4P-203ENST00000603168 689 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 BRDTP1-201ENST00000605735 677 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GTF2A1P52655 AC004808.2-201ENST00000627965 773 ntBASIC3.98□□□□□ -1.77
GTF2A1P52655 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GTF2A1P52655 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GTF2A1P52655 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
GTF2A1P52655 AL929601.4-201ENST00000613011 1341 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 OR10AB1P-202ENST00000641219 1686 ntBASIC3.97□□□□□ -1.77
GTF2A1P52655 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
GTF2A1P52655 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms